Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SFTPBP07988 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SFTPBP07988 MIR3648-2-201ENST00000581792 180 ntBASIC21.26■□□□□ 0.99
SFTPBP07988 AC016575.1-201ENST00000607026 382 ntBASIC21.26■□□□□ 0.99
SFTPBP07988 MIR3648-1-201ENST00000615959 180 ntBASIC21.26■□□□□ 0.99
SFTPBP07988 CR559946.2-201ENST00000623684 991 ntBASIC21.26■□□□□ 0.99
SFTPBP07988 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.26■□□□□ 0.99
SFTPBP07988 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.25■□□□□ 0.99
SFTPBP07988 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.25■□□□□ 0.99
SFTPBP07988 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SFTPBP07988 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.24■□□□□ 0.99
SFTPBP07988 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SFTPBP07988 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.24■□□□□ 0.99
SFTPBP07988 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SFTPBP07988 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SFTPBP07988 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.24■□□□□ 0.99
SFTPBP07988 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.24■□□□□ 0.99
SFTPBP07988 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SFTPBP07988 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SFTPBP07988 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SFTPBP07988 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SFTPBP07988 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SFTPBP07988 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SFTPBP07988 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SFTPBP07988 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.23■□□□□ 0.99
SFTPBP07988 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.23■□□□□ 0.99
SFTPBP07988 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.23■□□□□ 0.99
SFTPBP07988 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SFTPBP07988 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.23■□□□□ 0.99
SFTPBP07988 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SFTPBP07988 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SFTPBP07988 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SFTPBP07988 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SFTPBP07988 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SFTPBP07988 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SFTPBP07988 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.22■□□□□ 0.99
SFTPBP07988 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SFTPBP07988 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SFTPBP07988 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.21■□□□□ 0.99
SFTPBP07988 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SFTPBP07988 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SFTPBP07988 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.2■□□□□ 0.98
SFTPBP07988 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SFTPBP07988 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SFTPBP07988 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L13-201ENST00000554103 1267 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L15-201ENST00000611059 1267 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L23-201ENST00000615195 1269 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L24-201ENST00000617576 1269 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L22-201ENST00000618238 1269 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L20-201ENST00000619712 1269 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L21-201ENST00000622058 1269 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L10-201ENST00000622460 1267 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 DUX4L25-201ENST00000624915 1269 ntBASIC21.2■□□□□ 0.98
SFTPBP07988 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SFTPBP07988 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SFTPBP07988 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SFTPBP07988 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SFTPBP07988 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SFTPBP07988 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SFTPBP07988 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.19■□□□□ 0.98
SFTPBP07988 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SFTPBP07988 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SFTPBP07988 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SFTPBP07988 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SFTPBP07988 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SFTPBP07988 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SFTPBP07988 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.18■□□□□ 0.98
SFTPBP07988 MIR639-201ENST00000384974 98 ntBASIC21.18■□□□□ 0.98
SFTPBP07988 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.18■□□□□ 0.98
SFTPBP07988 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SFTPBP07988 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SFTPBP07988 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SFTPBP07988 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.17■□□□□ 0.98
SFTPBP07988 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SFTPBP07988 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SFTPBP07988 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.16■□□□□ 0.98
SFTPBP07988 AL449106.1-201ENST00000608517 1980 ntBASIC21.16■□□□□ 0.98
SFTPBP07988 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SFTPBP07988 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SFTPBP07988 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.16■□□□□ 0.98
SFTPBP07988 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SFTPBP07988 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SFTPBP07988 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SFTPBP07988 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SFTPBP07988 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SFTPBP07988 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SFTPBP07988 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SFTPBP07988 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.14■□□□□ 0.97
SFTPBP07988 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SFTPBP07988 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SFTPBP07988 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SFTPBP07988 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SFTPBP07988 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SFTPBP07988 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.13■□□□□ 0.97
SFTPBP07988 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.13■□□□□ 0.97
SFTPBP07988 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SFTPBP07988 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.12■□□□□ 0.97
SFTPBP07988 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.12■□□□□ 0.97
SFTPBP07988 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms