Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC108673.1-201ENST00000510422 1159 ntBASIC18.76■□□□□ 0.59
TCRAP04437 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRAP04437 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRAP04437 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRAP04437 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRAP04437 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRAP04437 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRAP04437 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRAP04437 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRAP04437 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRAP04437 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRAP04437 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRAP04437 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRAP04437 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRAP04437 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRAP04437 AC142472.1-201ENST00000612013 1741 ntBASIC18.74■□□□□ 0.59
TCRAP04437 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TCRAP04437 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRAP04437 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.73■□□□□ 0.59
TCRAP04437 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TCRAP04437 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRAP04437 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRAP04437 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TCRAP04437 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRAP04437 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRAP04437 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRAP04437 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TCRAP04437 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.72■□□□□ 0.59
TCRAP04437 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRAP04437 AC005559.1-201ENST00000589661 871 ntBASIC18.71■□□□□ 0.59
TCRAP04437 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRAP04437 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRAP04437 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRAP04437 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRAP04437 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TCRAP04437 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRAP04437 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRAP04437 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRAP04437 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRAP04437 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRAP04437 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRAP04437 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRAP04437 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRAP04437 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.68■□□□□ 0.58
TCRAP04437 MIR6090-201ENST00000622481 60 ntBASIC18.68■□□□□ 0.58
TCRAP04437 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRAP04437 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TCRAP04437 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRAP04437 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TCRAP04437 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TCRAP04437 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRAP04437 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TCRAP04437 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRAP04437 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRAP04437 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRAP04437 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TCRAP04437 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRAP04437 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRAP04437 ERN1-208ENST00000606895 2068 ntBASIC18.64■□□□□ 0.57
TCRAP04437 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRAP04437 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRAP04437 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRAP04437 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TCRAP04437 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRAP04437 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.63■□□□□ 0.57
TCRAP04437 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.63■□□□□ 0.57
TCRAP04437 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRAP04437 WHAMMP3-201ENST00000611636 1609 ntBASIC18.63■□□□□ 0.57
TCRAP04437 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRAP04437 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRAP04437 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRAP04437 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TCRAP04437 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRAP04437 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.62■□□□□ 0.57
TCRAP04437 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRAP04437 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRAP04437 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRAP04437 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.61■□□□□ 0.57
TCRAP04437 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRAP04437 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.61■□□□□ 0.57
TCRAP04437 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRAP04437 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRAP04437 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRAP04437 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.6■□□□□ 0.57
TCRAP04437 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.6■□□□□ 0.57
TCRAP04437 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRAP04437 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRAP04437 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRAP04437 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TCRAP04437 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TCRAP04437 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCRAP04437 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCRAP04437 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TCRAP04437 AC010501.1-201ENST00000606270 1962 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms