Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF13O75888 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF13O75888 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF13O75888 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF13O75888 AC009831.1-201ENST00000580420 1582 ntBASIC21.92■■□□□ 1.1
TNFSF13O75888 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.92■■□□□ 1.1
TNFSF13O75888 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF13O75888 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.92■■□□□ 1.1
TNFSF13O75888 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TNFSF13O75888 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TNFSF13O75888 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TNFSF13O75888 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF13O75888 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.91■■□□□ 1.1
TNFSF13O75888 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.91■■□□□ 1.1
TNFSF13O75888 AL033527.3-201ENST00000566366 1196 ntBASIC21.91■■□□□ 1.1
TNFSF13O75888 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.91■■□□□ 1.1
TNFSF13O75888 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF13O75888 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF13O75888 WHAMMP3-201ENST00000611636 1609 ntBASIC21.91■■□□□ 1.1
TNFSF13O75888 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TNFSF13O75888 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFSF13O75888 AC133552.2-201ENST00000619106 1032 ntBASIC21.9■■□□□ 1.1
TNFSF13O75888 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFSF13O75888 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.89■■□□□ 1.09
TNFSF13O75888 AC026202.3-201ENST00000600805 1127 ntBASIC21.89■■□□□ 1.09
TNFSF13O75888 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNFSF13O75888 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TNFSF13O75888 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFSF13O75888 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFSF13O75888 AC004987.1-201ENST00000428627 508 ntBASIC21.88■■□□□ 1.09
TNFSF13O75888 RP9P-202ENST00000450133 1212 ntBASIC21.88■■□□□ 1.09
TNFSF13O75888 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TNFSF13O75888 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF13O75888 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF13O75888 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TNFSF13O75888 ATP5G2P3-201ENST00000429083 425 ntBASIC21.87■■□□□ 1.09
TNFSF13O75888 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.87■■□□□ 1.09
TNFSF13O75888 AL592293.1-201ENST00000502889 1188 ntBASIC21.87■■□□□ 1.09
TNFSF13O75888 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF13O75888 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF13O75888 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFSF13O75888 TSPY13P-201ENST00000338964 914 ntBASIC21.86■■□□□ 1.09
TNFSF13O75888 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TNFSF13O75888 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
TNFSF13O75888 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TNFSF13O75888 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.86■■□□□ 1.09
TNFSF13O75888 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF13O75888 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TNFSF13O75888 AC093536.1-201ENST00000569153 554 ntBASIC21.85■■□□□ 1.09
TNFSF13O75888 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TNFSF13O75888 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF13O75888 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.85■■□□□ 1.09
TNFSF13O75888 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF13O75888 AL359504.2-201ENST00000605506 1601 ntBASIC21.84■■□□□ 1.09
TNFSF13O75888 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TNFSF13O75888 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.84■■□□□ 1.09
TNFSF13O75888 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF13O75888 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF13O75888 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TNFSF13O75888 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.84■■□□□ 1.09
TNFSF13O75888 MIR3960-201ENST00000583311 91 ntBASIC21.84■■□□□ 1.09
TNFSF13O75888 AC129492.7-201ENST00000622992 756 ntBASIC21.84■■□□□ 1.09
TNFSF13O75888 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF13O75888 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
TNFSF13O75888 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
TNFSF13O75888 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF13O75888 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF13O75888 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.83■■□□□ 1.09
TNFSF13O75888 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF13O75888 RAP2CP1-202ENST00000605179 643 ntBASIC21.83■■□□□ 1.09
TNFSF13O75888 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TNFSF13O75888 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF13O75888 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF13O75888 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF13O75888 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF13O75888 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TNFSF13O75888 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF13O75888 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNFSF13O75888 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNFSF13O75888 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFSF13O75888 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFSF13O75888 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNFSF13O75888 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFSF13O75888 LINC01003-201ENST00000564834 1764 ntBASIC21.8■■□□□ 1.08
TNFSF13O75888 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF13O75888 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFSF13O75888 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF13O75888 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFSF13O75888 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF13O75888 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TNFSF13O75888 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF13O75888 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF13O75888 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF13O75888 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF13O75888 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TNFSF13O75888 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFSF13O75888 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF13O75888 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF13O75888 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF13O75888 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms