Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSSCA1O60232 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSSCA1O60232 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSSCA1O60232 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSSCA1O60232 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSSCA1O60232 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SSSCA1O60232 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSSCA1O60232 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSSCA1O60232 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSSCA1O60232 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.02■□□□□ 0.79
SSSCA1O60232 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSSCA1O60232 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSSCA1O60232 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSSCA1O60232 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSSCA1O60232 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSSCA1O60232 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SSSCA1O60232 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20■□□□□ 0.79
SSSCA1O60232 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSSCA1O60232 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSSCA1O60232 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SSSCA1O60232 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SSSCA1O60232 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSSCA1O60232 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSSCA1O60232 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSSCA1O60232 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSSCA1O60232 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSSCA1O60232 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSSCA1O60232 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.97■□□□□ 0.79
SSSCA1O60232 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.97■□□□□ 0.79
SSSCA1O60232 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSSCA1O60232 ERN1-208ENST00000606895 2068 ntBASIC19.97■□□□□ 0.79
SSSCA1O60232 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSSCA1O60232 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.96■□□□□ 0.79
SSSCA1O60232 CAHM-201ENST00000604200 896 ntBASIC19.96■□□□□ 0.79
SSSCA1O60232 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSSCA1O60232 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSSCA1O60232 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSSCA1O60232 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSSCA1O60232 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSSCA1O60232 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSSCA1O60232 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.95■□□□□ 0.78
SSSCA1O60232 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSSCA1O60232 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SSSCA1O60232 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSSCA1O60232 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSSCA1O60232 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSSCA1O60232 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSSCA1O60232 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.93■□□□□ 0.78
SSSCA1O60232 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSSCA1O60232 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.93■□□□□ 0.78
SSSCA1O60232 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSSCA1O60232 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.92■□□□□ 0.78
SSSCA1O60232 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SSSCA1O60232 AC142472.1-201ENST00000612013 1741 ntBASIC19.92■□□□□ 0.78
SSSCA1O60232 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSSCA1O60232 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSSCA1O60232 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSSCA1O60232 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSSCA1O60232 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.91■□□□□ 0.78
SSSCA1O60232 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSSCA1O60232 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSSCA1O60232 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.91■□□□□ 0.78
SSSCA1O60232 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SSSCA1O60232 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SSSCA1O60232 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.9■□□□□ 0.78
SSSCA1O60232 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSSCA1O60232 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SSSCA1O60232 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSSCA1O60232 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSSCA1O60232 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
SSSCA1O60232 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSSCA1O60232 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSSCA1O60232 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSSCA1O60232 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSSCA1O60232 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SSSCA1O60232 LINC00273-201ENST00000539813 1452 ntBASIC19.88■□□□□ 0.77
SSSCA1O60232 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.88■□□□□ 0.77
SSSCA1O60232 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.88■□□□□ 0.77
SSSCA1O60232 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSSCA1O60232 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSSCA1O60232 MIR762-201ENST00000390236 83 ntBASIC19.88■□□□□ 0.77
SSSCA1O60232 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.88■□□□□ 0.77
SSSCA1O60232 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.88■□□□□ 0.77
SSSCA1O60232 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSSCA1O60232 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSSCA1O60232 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSSCA1O60232 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms