Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.1■■□□□ 1.13
CCL21O00585 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCL21O00585 AC009299.2-201ENST00000482477 511 ntBASIC22.1■■□□□ 1.13
CCL21O00585 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.1■■□□□ 1.13
CCL21O00585 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CCL21O00585 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.1■■□□□ 1.13
CCL21O00585 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCL21O00585 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCL21O00585 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.09■■□□□ 1.13
CCL21O00585 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCL21O00585 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
CCL21O00585 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCL21O00585 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.08■■□□□ 1.13
CCL21O00585 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
CCL21O00585 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
CCL21O00585 AL592295.1-201ENST00000400984 884 ntBASIC22.07■■□□□ 1.12
CCL21O00585 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.07■■□□□ 1.12
CCL21O00585 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.07■■□□□ 1.12
CCL21O00585 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCL21O00585 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCL21O00585 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCL21O00585 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.05■■□□□ 1.12
CCL21O00585 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCL21O00585 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCL21O00585 AC103834.1-201ENST00000520383 144 ntBASIC22.04■■□□□ 1.12
CCL21O00585 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CCL21O00585 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.03■■□□□ 1.12
CCL21O00585 AC131212.1-201ENST00000613771 668 ntBASIC22.03■■□□□ 1.12
CCL21O00585 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCL21O00585 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.02■■□□□ 1.12
CCL21O00585 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.02■■□□□ 1.12
CCL21O00585 PVT1_1.1-201ENST00000615125 194 ntBASIC22.02■■□□□ 1.12
CCL21O00585 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCL21O00585 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.02■■□□□ 1.12
CCL21O00585 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CCL21O00585 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CCL21O00585 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.01■■□□□ 1.11
CCL21O00585 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCL21O00585 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCL21O00585 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.01■■□□□ 1.11
CCL21O00585 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCL21O00585 ABCB10P3-201ENST00000561950 2166 ntBASIC22.01■■□□□ 1.11
CCL21O00585 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL21O00585 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22■■□□□ 1.11
CCL21O00585 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22■■□□□ 1.11
CCL21O00585 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22■■□□□ 1.11
CCL21O00585 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCL21O00585 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.99■■□□□ 1.11
CCL21O00585 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCL21O00585 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCL21O00585 AP002414.2-202ENST00000590929 1450 ntBASIC21.98■■□□□ 1.11
CCL21O00585 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCL21O00585 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CCL21O00585 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.98■■□□□ 1.11
CCL21O00585 MIR4508-201ENST00000584178 70 ntBASIC21.98■■□□□ 1.11
CCL21O00585 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCL21O00585 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCL21O00585 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.97■■□□□ 1.11
CCL21O00585 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.97■■□□□ 1.11
CCL21O00585 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCL21O00585 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL21O00585 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CCL21O00585 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL21O00585 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL21O00585 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.95■■□□□ 1.1
CCL21O00585 THA1P-201ENST00000590384 1145 ntBASIC21.95■■□□□ 1.1
CCL21O00585 AL139393.2-201ENST00000608721 2025 ntBASIC21.95■■□□□ 1.1
CCL21O00585 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL21O00585 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
CCL21O00585 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL21O00585 GUSBP5-201ENST00000418136 578 ntBASIC21.94■■□□□ 1.1
CCL21O00585 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL21O00585 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms