Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTCAO00442 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.65■■□□□ 1.38
RTCAO00442 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.65■■□□□ 1.38
RTCAO00442 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTCAO00442 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCAO00442 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RTCAO00442 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTCAO00442 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTCAO00442 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTCAO00442 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTCAO00442 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTCAO00442 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RTCAO00442 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.62■■□□□ 1.37
RTCAO00442 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
RTCAO00442 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.62■■□□□ 1.37
RTCAO00442 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCAO00442 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCAO00442 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCAO00442 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.6■■□□□ 1.37
RTCAO00442 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCAO00442 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.6■■□□□ 1.37
RTCAO00442 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.6■■□□□ 1.37
RTCAO00442 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.6■■□□□ 1.37
RTCAO00442 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTCAO00442 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCAO00442 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTCAO00442 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RTCAO00442 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RTCAO00442 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RTCAO00442 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTCAO00442 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTCAO00442 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.58■■□□□ 1.37
RTCAO00442 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RTCAO00442 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.58■■□□□ 1.37
RTCAO00442 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
RTCAO00442 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.58■■□□□ 1.36
RTCAO00442 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RTCAO00442 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RTCAO00442 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.57■■□□□ 1.36
RTCAO00442 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCAO00442 AP004609.3-201ENST00000610705 1884 ntBASIC23.57■■□□□ 1.36
RTCAO00442 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCAO00442 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.57■■□□□ 1.36
RTCAO00442 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCAO00442 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTCAO00442 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.56■■□□□ 1.36
RTCAO00442 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTCAO00442 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTCAO00442 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTCAO00442 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTCAO00442 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTCAO00442 AL359258.2-201ENST00000564063 1566 ntBASIC23.55■■□□□ 1.36
RTCAO00442 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
RTCAO00442 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.54■■□□□ 1.36
RTCAO00442 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RTCAO00442 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.53■■□□□ 1.36
RTCAO00442 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCAO00442 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.51■■□□□ 1.35
RTCAO00442 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
RTCAO00442 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTCAO00442 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RTCAO00442 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RTCAO00442 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCAO00442 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCAO00442 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCAO00442 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCAO00442 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.5■■□□□ 1.35
RTCAO00442 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RTCAO00442 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTCAO00442 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RTCAO00442 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTCAO00442 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTCAO00442 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTCAO00442 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.49■■□□□ 1.35
RTCAO00442 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.49■■□□□ 1.35
RTCAO00442 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.49■■□□□ 1.35
RTCAO00442 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTCAO00442 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTCAO00442 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTCAO00442 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTCAO00442 AC142472.1-201ENST00000612013 1741 ntBASIC23.47■■□□□ 1.35
RTCAO00442 MIR4449-201ENST00000578365 66 ntBASIC23.47■■□□□ 1.35
RTCAO00442 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTCAO00442 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTCAO00442 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTCAO00442 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTCAO00442 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTCAO00442 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms