Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.7■□□□□ 0.42
LYRM9A8MSI8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LYRM9A8MSI8 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.7■□□□□ 0.42
LYRM9A8MSI8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYRM9A8MSI8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LYRM9A8MSI8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYRM9A8MSI8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.69■□□□□ 0.42
LYRM9A8MSI8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYRM9A8MSI8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.68■□□□□ 0.42
LYRM9A8MSI8 GPX1-201ENST00000419349 1106 ntBASIC17.68■□□□□ 0.42
LYRM9A8MSI8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYRM9A8MSI8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYRM9A8MSI8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.67■□□□□ 0.42
LYRM9A8MSI8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.66■□□□□ 0.42
LYRM9A8MSI8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.66■□□□□ 0.42
LYRM9A8MSI8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYRM9A8MSI8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYRM9A8MSI8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYRM9A8MSI8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LYRM9A8MSI8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LYRM9A8MSI8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYRM9A8MSI8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYRM9A8MSI8 AL449106.1-201ENST00000608517 1980 ntBASIC17.64■□□□□ 0.41
LYRM9A8MSI8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 AC092296.2-201ENST00000589470 999 ntBASIC17.63■□□□□ 0.41
LYRM9A8MSI8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYRM9A8MSI8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYRM9A8MSI8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYRM9A8MSI8 ECEL1P2-201ENST00000461596 1295 ntBASIC17.62■□□□□ 0.41
LYRM9A8MSI8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYRM9A8MSI8 HSD17B1P1-201ENST00000590052 955 ntBASIC17.62■□□□□ 0.41
LYRM9A8MSI8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LYRM9A8MSI8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LYRM9A8MSI8 RNF126P1-201ENST00000567452 1320 ntBASIC17.61■□□□□ 0.41
LYRM9A8MSI8 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.61■□□□□ 0.41
LYRM9A8MSI8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYRM9A8MSI8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYRM9A8MSI8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYRM9A8MSI8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYRM9A8MSI8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LYRM9A8MSI8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYRM9A8MSI8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LYRM9A8MSI8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYRM9A8MSI8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYRM9A8MSI8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYRM9A8MSI8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LYRM9A8MSI8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.59■□□□□ 0.41
LYRM9A8MSI8 AL157400.5-201ENST00000507624 621 ntBASIC17.59■□□□□ 0.41
LYRM9A8MSI8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYRM9A8MSI8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LYRM9A8MSI8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYRM9A8MSI8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYRM9A8MSI8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYRM9A8MSI8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LYRM9A8MSI8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LYRM9A8MSI8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYRM9A8MSI8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 AC142472.1-201ENST00000612013 1741 ntBASIC17.56■□□□□ 0.4
LYRM9A8MSI8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
LYRM9A8MSI8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 SMPD5-203ENST00000639008 1464 ntBASIC17.55■□□□□ 0.4
LYRM9A8MSI8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYRM9A8MSI8 AL359504.2-201ENST00000605506 1601 ntBASIC17.54■□□□□ 0.4
LYRM9A8MSI8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYRM9A8MSI8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYRM9A8MSI8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.54■□□□□ 0.4
LYRM9A8MSI8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.54■□□□□ 0.4
LYRM9A8MSI8 AP004609.3-201ENST00000610705 1884 ntBASIC17.54■□□□□ 0.4
LYRM9A8MSI8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYRM9A8MSI8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYRM9A8MSI8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYRM9A8MSI8 RARRES2P2-201ENST00000394842 485 ntBASIC17.53■□□□□ 0.4
LYRM9A8MSI8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms