Protein–RNA interactions for Protein: A6NLI5

TRIM64C, Putative tripartite motif-containing protein 64C, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM64CA6NLI5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM64CA6NLI5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM64CA6NLI5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM64CA6NLI5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM64CA6NLI5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM64CA6NLI5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
TRIM64CA6NLI5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM64CA6NLI5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM64CA6NLI5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM64CA6NLI5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM64CA6NLI5 AC068473.5-201ENST00000616428 2072 ntBASIC22.56■■□□□ 1.2
TRIM64CA6NLI5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM64CA6NLI5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM64CA6NLI5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM64CA6NLI5 AC079834.2-201ENST00000609776 1949 ntBASIC22.56■■□□□ 1.2
TRIM64CA6NLI5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM64CA6NLI5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM64CA6NLI5 DYNLL1-208ENST00000550178 581 ntBASIC22.54■■□□□ 1.2
TRIM64CA6NLI5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM64CA6NLI5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM64CA6NLI5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM64CA6NLI5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM64CA6NLI5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM64CA6NLI5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM64CA6NLI5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
TRIM64CA6NLI5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM64CA6NLI5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM64CA6NLI5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIM64CA6NLI5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM64CA6NLI5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM64CA6NLI5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRIM64CA6NLI5 AP004609.3-201ENST00000610705 1884 ntBASIC22.51■■□□□ 1.19
TRIM64CA6NLI5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM64CA6NLI5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM64CA6NLI5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM64CA6NLI5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM64CA6NLI5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM64CA6NLI5 AC138932.3-201ENST00000567634 1902 ntBASIC22.49■■□□□ 1.19
TRIM64CA6NLI5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TRIM64CA6NLI5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM64CA6NLI5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM64CA6NLI5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM64CA6NLI5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM64CA6NLI5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM64CA6NLI5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM64CA6NLI5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM64CA6NLI5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM64CA6NLI5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM64CA6NLI5 AL031258.1-201ENST00000623562 325 ntBASIC22.46■■□□□ 1.19
TRIM64CA6NLI5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM64CA6NLI5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM64CA6NLI5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM64CA6NLI5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.44■■□□□ 1.18
TRIM64CA6NLI5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM64CA6NLI5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 AC022211.4-201ENST00000625094 2161 ntBASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM64CA6NLI5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM64CA6NLI5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 CLDN5-201ENST00000403084 2357 ntBASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM64CA6NLI5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms