Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 AL139125.2-201ENST00000623134 1869 ntBASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM27A0A1W2PRY6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMIM27A0A1W2PRY6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMIM27A0A1W2PRY6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM27A0A1W2PRY6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM27A0A1W2PRY6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SMIM27A0A1W2PRY6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMIM27A0A1W2PRY6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM27A0A1W2PRY6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SMIM27A0A1W2PRY6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM27A0A1W2PRY6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM27A0A1W2PRY6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM27A0A1W2PRY6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM27A0A1W2PRY6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM27A0A1W2PRY6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM27A0A1W2PRY6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM27A0A1W2PRY6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM27A0A1W2PRY6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.42■□□□□ 0.54
SMIM27A0A1W2PRY6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMIM27A0A1W2PRY6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMIM27A0A1W2PRY6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMIM27A0A1W2PRY6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM27A0A1W2PRY6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.4■□□□□ 0.54
SMIM27A0A1W2PRY6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM27A0A1W2PRY6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM27A0A1W2PRY6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM27A0A1W2PRY6 AC138932.3-201ENST00000567634 1902 ntBASIC18.4■□□□□ 0.54
SMIM27A0A1W2PRY6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SMIM27A0A1W2PRY6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM27A0A1W2PRY6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM27A0A1W2PRY6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM27A0A1W2PRY6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM27A0A1W2PRY6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM27A0A1W2PRY6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM27A0A1W2PRY6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM27A0A1W2PRY6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.38■□□□□ 0.53
SMIM27A0A1W2PRY6 AC022211.4-201ENST00000625094 2161 ntBASIC18.38■□□□□ 0.53
SMIM27A0A1W2PRY6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMIM27A0A1W2PRY6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM27A0A1W2PRY6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 AC142472.1-201ENST00000612013 1741 ntBASIC18.37■□□□□ 0.53
SMIM27A0A1W2PRY6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms