Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-4A0A1B0GX49 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-4A0A1B0GX49 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 MIR219A2-201ENST00000608502 1504 ntBASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV6-4A0A1B0GX49 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-4A0A1B0GX49 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-4A0A1B0GX49 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV6-4A0A1B0GX49 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-4A0A1B0GX49 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-4A0A1B0GX49 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-4A0A1B0GX49 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRBV6-4A0A1B0GX49 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-4A0A1B0GX49 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRBV6-4A0A1B0GX49 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV6-4A0A1B0GX49 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV6-4A0A1B0GX49 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRBV6-4A0A1B0GX49 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-4A0A1B0GX49 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRBV6-4A0A1B0GX49 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-4A0A1B0GX49 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV6-4A0A1B0GX49 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-4A0A1B0GX49 CR559946.2-201ENST00000623684 991 ntBASIC17.38■□□□□ 0.37
TRBV6-4A0A1B0GX49 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-4A0A1B0GX49 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-4A0A1B0GX49 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-4A0A1B0GX49 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV6-4A0A1B0GX49 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 HLA-V-202ENST00000446817 847 ntBASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV6-4A0A1B0GX49 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 AC091060.1-201ENST00000623524 1766 ntBASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 MIR3648-2-201ENST00000581792 180 ntBASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 MIR3648-1-201ENST00000615959 180 ntBASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV6-4A0A1B0GX49 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-4A0A1B0GX49 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-4A0A1B0GX49 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-4A0A1B0GX49 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-4A0A1B0GX49 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV6-4A0A1B0GX49 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.34■□□□□ 0.37
TRBV6-4A0A1B0GX49 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-4A0A1B0GX49 AC145676.1-201ENST00000514988 2004 ntBASIC17.33■□□□□ 0.37
TRBV6-4A0A1B0GX49 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-4A0A1B0GX49 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-4A0A1B0GX49 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
TRBV6-4A0A1B0GX49 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-4A0A1B0GX49 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-4A0A1B0GX49 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 AC126177.7-201ENST00000547904 679 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms