Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 MIR3665-201ENST00000578708 105 ntBASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 AC092803.2-201ENST00000564287 1899 ntBASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 DUSP8P4-201ENST00000399538 1761 ntBASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C13orf42A0A1B0GVH6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C13orf42A0A1B0GVH6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 DUX4L28-201ENST00000623687 678 ntBASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 AL162393.1-201ENST00000437852 946 ntBASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 AC018358.1-201ENST00000631079 1402 ntBASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
C13orf42A0A1B0GVH6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C13orf42A0A1B0GVH6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C13orf42A0A1B0GVH6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 315.2 ms