Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CYP46A1Q9Y6A2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.6■■■□□ 2.33
CYP46A1Q9Y6A2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.6■■■□□ 2.33
CYP46A1Q9Y6A2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
CYP46A1Q9Y6A2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CYP46A1Q9Y6A2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.59■■■□□ 2.33
CYP46A1Q9Y6A2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.59■■■□□ 2.33
CYP46A1Q9Y6A2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.59■■■□□ 2.33
CYP46A1Q9Y6A2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.58■■■□□ 2.33
CYP46A1Q9Y6A2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.58■■■□□ 2.33
CYP46A1Q9Y6A2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L13-201ENST00000554103 1267 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L15-201ENST00000611059 1267 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L23-201ENST00000615195 1269 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L24-201ENST00000617576 1269 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L22-201ENST00000618238 1269 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L20-201ENST00000619712 1269 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L21-201ENST00000622058 1269 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L10-201ENST00000622460 1267 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L25-201ENST00000624915 1269 ntBASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.57■■■□□ 2.32
CYP46A1Q9Y6A2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
CYP46A1Q9Y6A2 AL449106.1-201ENST00000608517 1980 ntBASIC29.56■■■□□ 2.32
CYP46A1Q9Y6A2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CYP46A1Q9Y6A2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CYP46A1Q9Y6A2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
CYP46A1Q9Y6A2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.54■■■□□ 2.32
CYP46A1Q9Y6A2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CYP46A1Q9Y6A2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L11-201ENST00000611504 1267 ntBASIC29.53■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L12-201ENST00000614593 1267 ntBASIC29.53■■■□□ 2.32
CYP46A1Q9Y6A2 DUX4L14-201ENST00000621227 1267 ntBASIC29.53■■■□□ 2.32
CYP46A1Q9Y6A2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CYP46A1Q9Y6A2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CYP46A1Q9Y6A2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CYP46A1Q9Y6A2 ZNRF2P2-203ENST00000454624 420 ntBASIC29.52■■■□□ 2.32
CYP46A1Q9Y6A2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CYP46A1Q9Y6A2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.32
CYP46A1Q9Y6A2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CYP46A1Q9Y6A2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CYP46A1Q9Y6A2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CYP46A1Q9Y6A2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CYP46A1Q9Y6A2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.49■■■□□ 2.31
CYP46A1Q9Y6A2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CYP46A1Q9Y6A2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CYP46A1Q9Y6A2 WHAMMP3-201ENST00000611636 1609 ntBASIC29.47■■■□□ 2.31
CYP46A1Q9Y6A2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CYP46A1Q9Y6A2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.47■■■□□ 2.31
CYP46A1Q9Y6A2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CYP46A1Q9Y6A2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CYP46A1Q9Y6A2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.46■■■□□ 2.31
CYP46A1Q9Y6A2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
CYP46A1Q9Y6A2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CYP46A1Q9Y6A2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.45■■■□□ 2.31
CYP46A1Q9Y6A2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
CYP46A1Q9Y6A2 AP004609.3-201ENST00000610705 1884 ntBASIC29.44■■■□□ 2.3
CYP46A1Q9Y6A2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.44■■■□□ 2.3
CYP46A1Q9Y6A2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CYP46A1Q9Y6A2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CYP46A1Q9Y6A2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CYP46A1Q9Y6A2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CYP46A1Q9Y6A2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
CYP46A1Q9Y6A2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CYP46A1Q9Y6A2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.42■■■□□ 2.3
CYP46A1Q9Y6A2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CYP46A1Q9Y6A2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CYP46A1Q9Y6A2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CYP46A1Q9Y6A2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.41■■■□□ 2.3
CYP46A1Q9Y6A2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.4■■■□□ 2.3
CYP46A1Q9Y6A2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CYP46A1Q9Y6A2 AC008813.1-201ENST00000536597 885 ntBASIC29.4■■■□□ 2.3
CYP46A1Q9Y6A2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.4■■■□□ 2.3
CYP46A1Q9Y6A2 ABHD17AP4-201ENST00000411545 909 ntBASIC29.39■■■□□ 2.3
CYP46A1Q9Y6A2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CYP46A1Q9Y6A2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CYP46A1Q9Y6A2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CYP46A1Q9Y6A2 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.38■■■□□ 2.29
CYP46A1Q9Y6A2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CYP46A1Q9Y6A2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CYP46A1Q9Y6A2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.38■■■□□ 2.29
CYP46A1Q9Y6A2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CYP46A1Q9Y6A2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms