Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPUSD1Q9UJJ7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.77■□□□□ 0.92
RPUSD1Q9UJJ7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RPUSD1Q9UJJ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.77■□□□□ 0.92
RPUSD1Q9UJJ7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 AC018358.1-201ENST00000631079 1402 ntBASIC20.76■□□□□ 0.91
RPUSD1Q9UJJ7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPUSD1Q9UJJ7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.75■□□□□ 0.91
RPUSD1Q9UJJ7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPUSD1Q9UJJ7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPUSD1Q9UJJ7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPUSD1Q9UJJ7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPUSD1Q9UJJ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPUSD1Q9UJJ7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPUSD1Q9UJJ7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPUSD1Q9UJJ7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPUSD1Q9UJJ7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPUSD1Q9UJJ7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.73■□□□□ 0.91
RPUSD1Q9UJJ7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD1Q9UJJ7 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.72■□□□□ 0.91
RPUSD1Q9UJJ7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RPUSD1Q9UJJ7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD1Q9UJJ7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD1Q9UJJ7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD1Q9UJJ7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD1Q9UJJ7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.71■□□□□ 0.91
RPUSD1Q9UJJ7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD1Q9UJJ7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPUSD1Q9UJJ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD1Q9UJJ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD1Q9UJJ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
RPUSD1Q9UJJ7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD1Q9UJJ7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPUSD1Q9UJJ7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD1Q9UJJ7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.7■□□□□ 0.9
RPUSD1Q9UJJ7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.7■□□□□ 0.9
RPUSD1Q9UJJ7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD1Q9UJJ7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD1Q9UJJ7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD1Q9UJJ7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD1Q9UJJ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD1Q9UJJ7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD1Q9UJJ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPUSD1Q9UJJ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 HSD17B1P1-201ENST00000590052 955 ntBASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD1Q9UJJ7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.65■□□□□ 0.9
RPUSD1Q9UJJ7 AC126177.7-201ENST00000547904 679 ntBASIC20.65■□□□□ 0.9
RPUSD1Q9UJJ7 AC022413.1-201ENST00000624602 984 ntBASIC20.65■□□□□ 0.9
RPUSD1Q9UJJ7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD1Q9UJJ7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RPUSD1Q9UJJ7 GPX1-201ENST00000419349 1106 ntBASIC20.64■□□□□ 0.89
RPUSD1Q9UJJ7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.64■□□□□ 0.89
RPUSD1Q9UJJ7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.64■□□□□ 0.89
RPUSD1Q9UJJ7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPUSD1Q9UJJ7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RPUSD1Q9UJJ7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPUSD1Q9UJJ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPUSD1Q9UJJ7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RPUSD1Q9UJJ7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.61■□□□□ 0.89
RPUSD1Q9UJJ7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms