Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHCBP1LQ9BZQ2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHCBP1LQ9BZQ2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SHCBP1LQ9BZQ2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SHCBP1LQ9BZQ2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHCBP1LQ9BZQ2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.46■■□□□ 1.51
SHCBP1LQ9BZQ2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHCBP1LQ9BZQ2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SHCBP1LQ9BZQ2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SHCBP1LQ9BZQ2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.45■■□□□ 1.5
SHCBP1LQ9BZQ2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SHCBP1LQ9BZQ2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
SHCBP1LQ9BZQ2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SHCBP1LQ9BZQ2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHCBP1LQ9BZQ2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.44■■□□□ 1.5
SHCBP1LQ9BZQ2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SHCBP1LQ9BZQ2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.43■■□□□ 1.5
SHCBP1LQ9BZQ2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHCBP1LQ9BZQ2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHCBP1LQ9BZQ2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHCBP1LQ9BZQ2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHCBP1LQ9BZQ2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.4■■□□□ 1.5
SHCBP1LQ9BZQ2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHCBP1LQ9BZQ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.39■■□□□ 1.5
SHCBP1LQ9BZQ2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHCBP1LQ9BZQ2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.39■■□□□ 1.49
SHCBP1LQ9BZQ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.39■■□□□ 1.49
SHCBP1LQ9BZQ2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.39■■□□□ 1.49
SHCBP1LQ9BZQ2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SHCBP1LQ9BZQ2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHCBP1LQ9BZQ2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHCBP1LQ9BZQ2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHCBP1LQ9BZQ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHCBP1LQ9BZQ2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHCBP1LQ9BZQ2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHCBP1LQ9BZQ2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.37■■□□□ 1.49
SHCBP1LQ9BZQ2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHCBP1LQ9BZQ2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHCBP1LQ9BZQ2 AC020928.2-201ENST00000588717 2197 ntBASIC24.35■■□□□ 1.49
SHCBP1LQ9BZQ2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHCBP1LQ9BZQ2 AC087741.3-201ENST00000624270 1347 ntBASIC24.35■■□□□ 1.49
SHCBP1LQ9BZQ2 AL162393.1-201ENST00000437852 946 ntBASIC24.34■■□□□ 1.49
SHCBP1LQ9BZQ2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.34■■□□□ 1.49
SHCBP1LQ9BZQ2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SHCBP1LQ9BZQ2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.34■■□□□ 1.49
SHCBP1LQ9BZQ2 AC044849.2-201ENST00000606596 710 ntBASIC24.33■■□□□ 1.49
SHCBP1LQ9BZQ2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.32■■□□□ 1.48
SHCBP1LQ9BZQ2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.31■■□□□ 1.48
SHCBP1LQ9BZQ2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.31■■□□□ 1.48
SHCBP1LQ9BZQ2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.31■■□□□ 1.48
SHCBP1LQ9BZQ2 AP004609.3-201ENST00000610705 1884 ntBASIC24.31■■□□□ 1.48
SHCBP1LQ9BZQ2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHCBP1LQ9BZQ2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.31■■□□□ 1.48
SHCBP1LQ9BZQ2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SHCBP1LQ9BZQ2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHCBP1LQ9BZQ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHCBP1LQ9BZQ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHCBP1LQ9BZQ2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.29■■□□□ 1.48
SHCBP1LQ9BZQ2 AC145676.1-201ENST00000514988 2004 ntBASIC24.28■■□□□ 1.48
SHCBP1LQ9BZQ2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.28■■□□□ 1.48
SHCBP1LQ9BZQ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SHCBP1LQ9BZQ2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SHCBP1LQ9BZQ2 AC110285.7-201ENST00000624417 1536 ntBASIC24.28■■□□□ 1.48
SHCBP1LQ9BZQ2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHCBP1LQ9BZQ2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHCBP1LQ9BZQ2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHCBP1LQ9BZQ2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.27■■□□□ 1.48
SHCBP1LQ9BZQ2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHCBP1LQ9BZQ2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.27■■□□□ 1.48
SHCBP1LQ9BZQ2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SHCBP1LQ9BZQ2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.26■■□□□ 1.47
SHCBP1LQ9BZQ2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHCBP1LQ9BZQ2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHCBP1LQ9BZQ2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
SHCBP1LQ9BZQ2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SHCBP1LQ9BZQ2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms