Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB39BQ96DA2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB39BQ96DA2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RAB39BQ96DA2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB39BQ96DA2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB39BQ96DA2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB39BQ96DA2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB39BQ96DA2 RARRES2P2-201ENST00000394842 485 ntBASIC21.14■□□□□ 0.97
RAB39BQ96DA2 AC022413.1-201ENST00000624602 984 ntBASIC21.14■□□□□ 0.97
RAB39BQ96DA2 AC142086.6-201ENST00000621154 1765 ntBASIC21.14■□□□□ 0.97
RAB39BQ96DA2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RAB39BQ96DA2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB39BQ96DA2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB39BQ96DA2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
RAB39BQ96DA2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAB39BQ96DA2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB39BQ96DA2 RNF126P1-201ENST00000567452 1320 ntBASIC21.12■□□□□ 0.97
RAB39BQ96DA2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB39BQ96DA2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB39BQ96DA2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB39BQ96DA2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB39BQ96DA2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB39BQ96DA2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB39BQ96DA2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB39BQ96DA2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB39BQ96DA2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB39BQ96DA2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB39BQ96DA2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB39BQ96DA2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB39BQ96DA2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RAB39BQ96DA2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB39BQ96DA2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB39BQ96DA2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB39BQ96DA2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RAB39BQ96DA2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAB39BQ96DA2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB39BQ96DA2 MIR219A2-201ENST00000608502 1504 ntBASIC21.08■□□□□ 0.96
RAB39BQ96DA2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB39BQ96DA2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB39BQ96DA2 AC126177.7-201ENST00000547904 679 ntBASIC21.07■□□□□ 0.96
RAB39BQ96DA2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB39BQ96DA2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAB39BQ96DA2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 ABHD17AP5-201ENST00000580133 923 ntBASIC21.06■□□□□ 0.96
RAB39BQ96DA2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.06■□□□□ 0.96
RAB39BQ96DA2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB39BQ96DA2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB39BQ96DA2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB39BQ96DA2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB39BQ96DA2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB39BQ96DA2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RAB39BQ96DA2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB39BQ96DA2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB39BQ96DA2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB39BQ96DA2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB39BQ96DA2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.02■□□□□ 0.95
RAB39BQ96DA2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RAB39BQ96DA2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms