Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
SMARCC2Q8TAQ2 MIR4449-201ENST00000578365 66 ntBASIC29.34■■■□□ 2.29
SMARCC2Q8TAQ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCC2Q8TAQ2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCC2Q8TAQ2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
SMARCC2Q8TAQ2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCC2Q8TAQ2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC2Q8TAQ2 AC110285.7-201ENST00000624417 1536 ntBASIC29.31■■■□□ 2.28
SMARCC2Q8TAQ2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC2Q8TAQ2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
SMARCC2Q8TAQ2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCC2Q8TAQ2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
SMARCC2Q8TAQ2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCC2Q8TAQ2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.29■■■□□ 2.28
SMARCC2Q8TAQ2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCC2Q8TAQ2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SMARCC2Q8TAQ2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.27■■■□□ 2.28
SMARCC2Q8TAQ2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCC2Q8TAQ2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
SMARCC2Q8TAQ2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.26■■■□□ 2.28
SMARCC2Q8TAQ2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMARCC2Q8TAQ2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.26■■■□□ 2.27
SMARCC2Q8TAQ2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMARCC2Q8TAQ2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.26■■■□□ 2.27
SMARCC2Q8TAQ2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCC2Q8TAQ2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SMARCC2Q8TAQ2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.25■■■□□ 2.27
SMARCC2Q8TAQ2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.25■■■□□ 2.27
SMARCC2Q8TAQ2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC2Q8TAQ2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC2Q8TAQ2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.24■■■□□ 2.27
SMARCC2Q8TAQ2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC2Q8TAQ2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.24■■■□□ 2.27
SMARCC2Q8TAQ2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
SMARCC2Q8TAQ2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
SMARCC2Q8TAQ2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
SMARCC2Q8TAQ2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC2Q8TAQ2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC2Q8TAQ2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC2Q8TAQ2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.22■■■□□ 2.27
SMARCC2Q8TAQ2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC2Q8TAQ2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC2Q8TAQ2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC2Q8TAQ2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC2Q8TAQ2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
SMARCC2Q8TAQ2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC2Q8TAQ2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.19■■■□□ 2.26
SMARCC2Q8TAQ2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
SMARCC2Q8TAQ2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMARCC2Q8TAQ2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC2Q8TAQ2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC2Q8TAQ2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
SMARCC2Q8TAQ2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.17■■■□□ 2.26
SMARCC2Q8TAQ2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.17■■■□□ 2.26
SMARCC2Q8TAQ2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.17■■■□□ 2.26
SMARCC2Q8TAQ2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCC2Q8TAQ2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCC2Q8TAQ2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SMARCC2Q8TAQ2 AC008813.1-201ENST00000536597 885 ntBASIC29.15■■■□□ 2.26
SMARCC2Q8TAQ2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SMARCC2Q8TAQ2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
SMARCC2Q8TAQ2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.15■■■□□ 2.26
SMARCC2Q8TAQ2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SMARCC2Q8TAQ2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
SMARCC2Q8TAQ2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
SMARCC2Q8TAQ2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
SMARCC2Q8TAQ2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.13■■■□□ 2.25
SMARCC2Q8TAQ2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
SMARCC2Q8TAQ2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.13■■■□□ 2.25
SMARCC2Q8TAQ2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SMARCC2Q8TAQ2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
SMARCC2Q8TAQ2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SMARCC2Q8TAQ2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.12■■■□□ 2.25
SMARCC2Q8TAQ2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.11■■■□□ 2.25
SMARCC2Q8TAQ2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SMARCC2Q8TAQ2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.11■■■□□ 2.25
SMARCC2Q8TAQ2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.1■■■□□ 2.25
SMARCC2Q8TAQ2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.1■■■□□ 2.25
SMARCC2Q8TAQ2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.1■■■□□ 2.25
SMARCC2Q8TAQ2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SMARCC2Q8TAQ2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
SMARCC2Q8TAQ2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
SMARCC2Q8TAQ2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
SMARCC2Q8TAQ2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms