Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01006Q8NI28 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01006Q8NI28 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01006Q8NI28 DUX4L18-201ENST00000553347 1267 ntBASIC19.67■□□□□ 0.74
LINC01006Q8NI28 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC01006Q8NI28 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC01006Q8NI28 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.66■□□□□ 0.74
LINC01006Q8NI28 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.66■□□□□ 0.74
LINC01006Q8NI28 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.66■□□□□ 0.74
LINC01006Q8NI28 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.66■□□□□ 0.74
LINC01006Q8NI28 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC01006Q8NI28 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01006Q8NI28 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01006Q8NI28 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01006Q8NI28 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LINC01006Q8NI28 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01006Q8NI28 AC026202.3-201ENST00000600805 1127 ntBASIC19.65■□□□□ 0.74
LINC01006Q8NI28 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01006Q8NI28 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01006Q8NI28 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01006Q8NI28 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01006Q8NI28 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01006Q8NI28 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.64■□□□□ 0.73
LINC01006Q8NI28 AC025884.2-201ENST00000553429 711 ntBASIC19.64■□□□□ 0.73
LINC01006Q8NI28 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LINC01006Q8NI28 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01006Q8NI28 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01006Q8NI28 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
LINC01006Q8NI28 AL139393.2-201ENST00000608721 2025 ntBASIC19.63■□□□□ 0.73
LINC01006Q8NI28 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LINC01006Q8NI28 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 ABCB10P3-201ENST00000561950 2166 ntBASIC19.62■□□□□ 0.73
LINC01006Q8NI28 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 RP9P-202ENST00000450133 1212 ntBASIC19.62■□□□□ 0.73
LINC01006Q8NI28 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01006Q8NI28 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01006Q8NI28 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LINC01006Q8NI28 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
LINC01006Q8NI28 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01006Q8NI28 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
LINC01006Q8NI28 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC01006Q8NI28 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01006Q8NI28 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LINC01006Q8NI28 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01006Q8NI28 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01006Q8NI28 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01006Q8NI28 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01006Q8NI28 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.58■□□□□ 0.73
LINC01006Q8NI28 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01006Q8NI28 AC093536.1-201ENST00000569153 554 ntBASIC19.58■□□□□ 0.72
LINC01006Q8NI28 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.58■□□□□ 0.72
LINC01006Q8NI28 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LINC01006Q8NI28 AP002414.2-202ENST00000590929 1450 ntBASIC19.57■□□□□ 0.72
LINC01006Q8NI28 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.57■□□□□ 0.72
LINC01006Q8NI28 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01006Q8NI28 DUX4L9-201ENST00000449051 1259 ntBASIC19.56■□□□□ 0.72
LINC01006Q8NI28 RAP2CP1-202ENST00000605179 643 ntBASIC19.56■□□□□ 0.72
LINC01006Q8NI28 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01006Q8NI28 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01006Q8NI28 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.55■□□□□ 0.72
LINC01006Q8NI28 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.55■□□□□ 0.72
LINC01006Q8NI28 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.55■□□□□ 0.72
LINC01006Q8NI28 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LINC01006Q8NI28 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 MIR3960-201ENST00000583311 91 ntBASIC19.54■□□□□ 0.72
LINC01006Q8NI28 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01006Q8NI28 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01006Q8NI28 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01006Q8NI28 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.53■□□□□ 0.72
LINC01006Q8NI28 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01006Q8NI28 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
LINC01006Q8NI28 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LINC01006Q8NI28 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC01006Q8NI28 BHLHE23-202ENST00000612929 1109 ntBASIC19.52■□□□□ 0.72
LINC01006Q8NI28 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LINC01006Q8NI28 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LINC01006Q8NI28 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
LINC01006Q8NI28 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.51■□□□□ 0.71
LINC01006Q8NI28 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01006Q8NI28 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms