Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE1Q8IWY4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE1Q8IWY4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.44■■□□□ 1.5
SCUBE1Q8IWY4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SCUBE1Q8IWY4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SCUBE1Q8IWY4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SCUBE1Q8IWY4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCUBE1Q8IWY4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.43■■□□□ 1.5
SCUBE1Q8IWY4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCUBE1Q8IWY4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.42■■□□□ 1.5
SCUBE1Q8IWY4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCUBE1Q8IWY4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCUBE1Q8IWY4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.41■■□□□ 1.5
SCUBE1Q8IWY4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCUBE1Q8IWY4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCUBE1Q8IWY4 ABHD17AP4-201ENST00000411545 909 ntBASIC24.4■■□□□ 1.5
SCUBE1Q8IWY4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.4■■□□□ 1.5
SCUBE1Q8IWY4 AC145676.1-201ENST00000514988 2004 ntBASIC24.4■■□□□ 1.5
SCUBE1Q8IWY4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCUBE1Q8IWY4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCUBE1Q8IWY4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.39■■□□□ 1.49
SCUBE1Q8IWY4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCUBE1Q8IWY4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.38■■□□□ 1.49
SCUBE1Q8IWY4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.38■■□□□ 1.49
SCUBE1Q8IWY4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCUBE1Q8IWY4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCUBE1Q8IWY4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE1Q8IWY4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE1Q8IWY4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 AC093323.1-202ENST00000635031 2045 ntBASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SCUBE1Q8IWY4 LINC00273-201ENST00000539813 1452 ntBASIC24.34■■□□□ 1.49
SCUBE1Q8IWY4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCUBE1Q8IWY4 ZNRF2P2-203ENST00000454624 420 ntBASIC24.33■■□□□ 1.49
SCUBE1Q8IWY4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.33■■□□□ 1.49
SCUBE1Q8IWY4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SCUBE1Q8IWY4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SCUBE1Q8IWY4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SCUBE1Q8IWY4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCUBE1Q8IWY4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.31■■□□□ 1.48
SCUBE1Q8IWY4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SCUBE1Q8IWY4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.31■■□□□ 1.48
SCUBE1Q8IWY4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCUBE1Q8IWY4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCUBE1Q8IWY4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SCUBE1Q8IWY4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCUBE1Q8IWY4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SCUBE1Q8IWY4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SCUBE1Q8IWY4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCUBE1Q8IWY4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCUBE1Q8IWY4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCUBE1Q8IWY4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCUBE1Q8IWY4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SCUBE1Q8IWY4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms