Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.32■■□□□ 1
ARFGEF3Q5TH69 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ARFGEF3Q5TH69 KRT18P60-201ENST00000312876 1297 ntBASIC21.31■■□□□ 1
ARFGEF3Q5TH69 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARFGEF3Q5TH69 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARFGEF3Q5TH69 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
ARFGEF3Q5TH69 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ARFGEF3Q5TH69 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARFGEF3Q5TH69 AC018358.1-201ENST00000631079 1402 ntBASIC21.28■■□□□ 1
ARFGEF3Q5TH69 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.28■■□□□ 1
ARFGEF3Q5TH69 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARFGEF3Q5TH69 AC025884.2-201ENST00000553429 711 ntBASIC21.28■■□□□ 1
ARFGEF3Q5TH69 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARFGEF3Q5TH69 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARFGEF3Q5TH69 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.27■■□□□ 1
ARFGEF3Q5TH69 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARFGEF3Q5TH69 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.27■■□□□ 1
ARFGEF3Q5TH69 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARFGEF3Q5TH69 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARFGEF3Q5TH69 AC012354.3-201ENST00000623734 483 ntBASIC21.27■■□□□ 1
ARFGEF3Q5TH69 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.26■□□□□ 0.99
ARFGEF3Q5TH69 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARFGEF3Q5TH69 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ARFGEF3Q5TH69 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARFGEF3Q5TH69 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.25■□□□□ 0.99
ARFGEF3Q5TH69 AC126177.7-201ENST00000547904 679 ntBASIC21.24■□□□□ 0.99
ARFGEF3Q5TH69 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARFGEF3Q5TH69 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.24■□□□□ 0.99
ARFGEF3Q5TH69 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARFGEF3Q5TH69 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARFGEF3Q5TH69 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARFGEF3Q5TH69 ECEL1P2-201ENST00000461596 1295 ntBASIC21.23■□□□□ 0.99
ARFGEF3Q5TH69 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARFGEF3Q5TH69 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARFGEF3Q5TH69 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARFGEF3Q5TH69 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.22■□□□□ 0.99
ARFGEF3Q5TH69 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARFGEF3Q5TH69 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.21■□□□□ 0.99
ARFGEF3Q5TH69 DRD5P2-201ENST00000421395 2012 ntBASIC21.2■□□□□ 0.99
ARFGEF3Q5TH69 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.2■□□□□ 0.98
ARFGEF3Q5TH69 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARFGEF3Q5TH69 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.19■□□□□ 0.98
ARFGEF3Q5TH69 AL359258.2-201ENST00000564063 1566 ntBASIC21.19■□□□□ 0.98
ARFGEF3Q5TH69 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ARFGEF3Q5TH69 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARFGEF3Q5TH69 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARFGEF3Q5TH69 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARFGEF3Q5TH69 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.18■□□□□ 0.98
ARFGEF3Q5TH69 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ARFGEF3Q5TH69 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.17■□□□□ 0.98
ARFGEF3Q5TH69 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.17■□□□□ 0.98
ARFGEF3Q5TH69 U85056.1-201ENST00000616429 682 ntBASIC21.17■□□□□ 0.98
ARFGEF3Q5TH69 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
ARFGEF3Q5TH69 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ARFGEF3Q5TH69 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ARFGEF3Q5TH69 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARFGEF3Q5TH69 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARFGEF3Q5TH69 AC007029.1-201ENST00000604183 313 ntBASIC21.15■□□□□ 0.98
ARFGEF3Q5TH69 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.15■□□□□ 0.98
ARFGEF3Q5TH69 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARFGEF3Q5TH69 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ARFGEF3Q5TH69 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARFGEF3Q5TH69 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.14■□□□□ 0.97
ARFGEF3Q5TH69 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 AC093536.1-201ENST00000569153 554 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms