Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
VARS2Q5ST30 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VARS2Q5ST30 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VARS2Q5ST30 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
VARS2Q5ST30 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
VARS2Q5ST30 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VARS2Q5ST30 AC012354.3-201ENST00000623734 483 ntBASIC26.65■■□□□ 1.86
VARS2Q5ST30 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
VARS2Q5ST30 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VARS2Q5ST30 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VARS2Q5ST30 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VARS2Q5ST30 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VARS2Q5ST30 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VARS2Q5ST30 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
VARS2Q5ST30 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
VARS2Q5ST30 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
VARS2Q5ST30 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VARS2Q5ST30 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VARS2Q5ST30 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.62■■□□□ 1.85
VARS2Q5ST30 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VARS2Q5ST30 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.61■■□□□ 1.85
VARS2Q5ST30 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
VARS2Q5ST30 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VARS2Q5ST30 AC018358.1-201ENST00000631079 1402 ntBASIC26.59■■□□□ 1.85
VARS2Q5ST30 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VARS2Q5ST30 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
VARS2Q5ST30 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.59■■□□□ 1.85
VARS2Q5ST30 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
VARS2Q5ST30 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VARS2Q5ST30 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.58■■□□□ 1.85
VARS2Q5ST30 AC007029.1-201ENST00000604183 313 ntBASIC26.58■■□□□ 1.85
VARS2Q5ST30 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VARS2Q5ST30 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
VARS2Q5ST30 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VARS2Q5ST30 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VARS2Q5ST30 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
VARS2Q5ST30 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VARS2Q5ST30 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.57■■□□□ 1.84
VARS2Q5ST30 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VARS2Q5ST30 KRT18P60-201ENST00000312876 1297 ntBASIC26.56■■□□□ 1.84
VARS2Q5ST30 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VARS2Q5ST30 SMPD5-203ENST00000639008 1464 ntBASIC26.55■■□□□ 1.84
VARS2Q5ST30 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VARS2Q5ST30 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VARS2Q5ST30 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.55■■□□□ 1.84
VARS2Q5ST30 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
VARS2Q5ST30 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VARS2Q5ST30 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VARS2Q5ST30 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VARS2Q5ST30 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VARS2Q5ST30 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
VARS2Q5ST30 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VARS2Q5ST30 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
VARS2Q5ST30 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VARS2Q5ST30 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.52■■□□□ 1.84
VARS2Q5ST30 AL033527.3-201ENST00000566366 1196 ntBASIC26.52■■□□□ 1.84
VARS2Q5ST30 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
VARS2Q5ST30 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.52■■□□□ 1.84
VARS2Q5ST30 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
VARS2Q5ST30 AC139426.1-201ENST00000568218 2529 ntBASIC26.51■■□□□ 1.84
VARS2Q5ST30 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.51■■□□□ 1.84
VARS2Q5ST30 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.51■■□□□ 1.83
VARS2Q5ST30 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.51■■□□□ 1.83
VARS2Q5ST30 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
VARS2Q5ST30 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.51■■□□□ 1.83
VARS2Q5ST30 AC025884.2-201ENST00000553429 711 ntBASIC26.51■■□□□ 1.83
VARS2Q5ST30 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VARS2Q5ST30 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
VARS2Q5ST30 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VARS2Q5ST30 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.49■■□□□ 1.83
VARS2Q5ST30 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VARS2Q5ST30 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.49■■□□□ 1.83
VARS2Q5ST30 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VARS2Q5ST30 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
VARS2Q5ST30 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
VARS2Q5ST30 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
VARS2Q5ST30 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.48■■□□□ 1.83
VARS2Q5ST30 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VARS2Q5ST30 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VARS2Q5ST30 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VARS2Q5ST30 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
VARS2Q5ST30 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.47■■□□□ 1.83
VARS2Q5ST30 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
VARS2Q5ST30 AC009831.1-201ENST00000580420 1582 ntBASIC26.46■■□□□ 1.83
VARS2Q5ST30 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.46■■□□□ 1.83
VARS2Q5ST30 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.46■■□□□ 1.83
VARS2Q5ST30 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
VARS2Q5ST30 AC004987.1-201ENST00000428627 508 ntBASIC26.46■■□□□ 1.83
VARS2Q5ST30 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VARS2Q5ST30 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
VARS2Q5ST30 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VARS2Q5ST30 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.45■■□□□ 1.82
VARS2Q5ST30 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VARS2Q5ST30 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.45■■□□□ 1.82
VARS2Q5ST30 AC133552.2-201ENST00000619106 1032 ntBASIC26.45■■□□□ 1.82
VARS2Q5ST30 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VARS2Q5ST30 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.45■■□□□ 1.82
VARS2Q5ST30 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
VARS2Q5ST30 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
VARS2Q5ST30 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms