Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.89■■□□□ 1.41
PDCD4Q53EL6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.89■■□□□ 1.41
PDCD4Q53EL6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDCD4Q53EL6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.88■■□□□ 1.41
PDCD4Q53EL6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDCD4Q53EL6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDCD4Q53EL6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDCD4Q53EL6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDCD4Q53EL6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDCD4Q53EL6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDCD4Q53EL6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.87■■□□□ 1.41
PDCD4Q53EL6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.87■■□□□ 1.41
PDCD4Q53EL6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.87■■□□□ 1.41
PDCD4Q53EL6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.86■■□□□ 1.41
PDCD4Q53EL6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.86■■□□□ 1.41
PDCD4Q53EL6 MIR3665-201ENST00000578708 105 ntBASIC23.86■■□□□ 1.41
PDCD4Q53EL6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.86■■□□□ 1.41
PDCD4Q53EL6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PDCD4Q53EL6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDCD4Q53EL6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDCD4Q53EL6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDCD4Q53EL6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.84■■□□□ 1.41
PDCD4Q53EL6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDCD4Q53EL6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDCD4Q53EL6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.84■■□□□ 1.41
PDCD4Q53EL6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDCD4Q53EL6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.83■■□□□ 1.41
PDCD4Q53EL6 AP004609.3-201ENST00000610705 1884 ntBASIC23.83■■□□□ 1.4
PDCD4Q53EL6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PDCD4Q53EL6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.82■■□□□ 1.4
PDCD4Q53EL6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDCD4Q53EL6 DUSP8P4-201ENST00000399538 1761 ntBASIC23.81■■□□□ 1.4
PDCD4Q53EL6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.81■■□□□ 1.4
PDCD4Q53EL6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PDCD4Q53EL6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDCD4Q53EL6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDCD4Q53EL6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDCD4Q53EL6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDCD4Q53EL6 AC092803.2-201ENST00000564287 1899 ntBASIC23.8■■□□□ 1.4
PDCD4Q53EL6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDCD4Q53EL6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDCD4Q53EL6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDCD4Q53EL6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.79■■□□□ 1.4
PDCD4Q53EL6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDCD4Q53EL6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDCD4Q53EL6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDCD4Q53EL6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDCD4Q53EL6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.76■■□□□ 1.39
PDCD4Q53EL6 AP006261.1-201ENST00000584783 668 ntBASIC23.76■■□□□ 1.39
PDCD4Q53EL6 AC110285.7-201ENST00000624417 1536 ntBASIC23.75■■□□□ 1.39
PDCD4Q53EL6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
PDCD4Q53EL6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PDCD4Q53EL6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDCD4Q53EL6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.75■■□□□ 1.39
PDCD4Q53EL6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDCD4Q53EL6 AC020928.2-201ENST00000588717 2197 ntBASIC23.75■■□□□ 1.39
PDCD4Q53EL6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.74■■□□□ 1.39
PDCD4Q53EL6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PDCD4Q53EL6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.74■■□□□ 1.39
PDCD4Q53EL6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDCD4Q53EL6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDCD4Q53EL6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
PDCD4Q53EL6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDCD4Q53EL6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDCD4Q53EL6 AC142472.1-201ENST00000612013 1741 ntBASIC23.73■■□□□ 1.39
PDCD4Q53EL6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDCD4Q53EL6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDCD4Q53EL6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDCD4Q53EL6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDCD4Q53EL6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDCD4Q53EL6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PDCD4Q53EL6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PDCD4Q53EL6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDCD4Q53EL6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDCD4Q53EL6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDCD4Q53EL6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PDCD4Q53EL6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
PDCD4Q53EL6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDCD4Q53EL6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.7■■□□□ 1.38
PDCD4Q53EL6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDCD4Q53EL6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDCD4Q53EL6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PDCD4Q53EL6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDCD4Q53EL6 AC087741.3-201ENST00000624270 1347 ntBASIC23.69■■□□□ 1.38
PDCD4Q53EL6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PDCD4Q53EL6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDCD4Q53EL6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDCD4Q53EL6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.69■■□□□ 1.38
PDCD4Q53EL6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDCD4Q53EL6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.68■■□□□ 1.38
PDCD4Q53EL6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.67■■□□□ 1.38
PDCD4Q53EL6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.67■■□□□ 1.38
PDCD4Q53EL6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms