Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NKX6-1P78426 U85056.1-201ENST00000616429 682 ntBASIC21.8■■□□□ 1.08
NKX6-1P78426 AC148477.6-201ENST00000623746 465 ntBASIC21.8■■□□□ 1.08
NKX6-1P78426 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
NKX6-1P78426 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NKX6-1P78426 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NKX6-1P78426 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.79■■□□□ 1.08
NKX6-1P78426 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NKX6-1P78426 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NKX6-1P78426 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.78■■□□□ 1.08
NKX6-1P78426 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NKX6-1P78426 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NKX6-1P78426 AP002414.2-202ENST00000590929 1450 ntBASIC21.77■■□□□ 1.08
NKX6-1P78426 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
NKX6-1P78426 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX6-1P78426 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
NKX6-1P78426 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
NKX6-1P78426 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NKX6-1P78426 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NKX6-1P78426 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NKX6-1P78426 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.76■■□□□ 1.07
NKX6-1P78426 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
NKX6-1P78426 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX6-1P78426 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.75■■□□□ 1.07
NKX6-1P78426 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.75■■□□□ 1.07
NKX6-1P78426 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NKX6-1P78426 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX6-1P78426 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX6-1P78426 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX6-1P78426 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX6-1P78426 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX6-1P78426 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.73■■□□□ 1.07
NKX6-1P78426 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NKX6-1P78426 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.73■■□□□ 1.07
NKX6-1P78426 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NKX6-1P78426 TSPY13P-201ENST00000338964 914 ntBASIC21.73■■□□□ 1.07
NKX6-1P78426 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NKX6-1P78426 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NKX6-1P78426 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.73■■□□□ 1.07
NKX6-1P78426 MIR219A2-201ENST00000608502 1504 ntBASIC21.72■■□□□ 1.07
NKX6-1P78426 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.72■■□□□ 1.07
NKX6-1P78426 AC060814.1-201ENST00000554326 538 ntBASIC21.72■■□□□ 1.07
NKX6-1P78426 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX6-1P78426 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX6-1P78426 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NKX6-1P78426 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.71■■□□□ 1.07
NKX6-1P78426 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX6-1P78426 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.71■■□□□ 1.07
NKX6-1P78426 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX6-1P78426 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NKX6-1P78426 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
NKX6-1P78426 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.7■■□□□ 1.06
NKX6-1P78426 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NKX6-1P78426 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
NKX6-1P78426 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NKX6-1P78426 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX6-1P78426 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX6-1P78426 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.69■■□□□ 1.06
NKX6-1P78426 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX6-1P78426 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX6-1P78426 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX6-1P78426 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX6-1P78426 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX6-1P78426 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NKX6-1P78426 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.68■■□□□ 1.06
NKX6-1P78426 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NKX6-1P78426 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX6-1P78426 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX6-1P78426 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX6-1P78426 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NKX6-1P78426 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.67■■□□□ 1.06
NKX6-1P78426 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.67■■□□□ 1.06
NKX6-1P78426 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.67■■□□□ 1.06
NKX6-1P78426 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 AC004987.1-201ENST00000428627 508 ntBASIC21.67■■□□□ 1.06
NKX6-1P78426 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX6-1P78426 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NKX6-1P78426 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX6-1P78426 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX6-1P78426 KRT18P60-201ENST00000312876 1297 ntBASIC21.66■■□□□ 1.06
NKX6-1P78426 ATP5G2P3-201ENST00000429083 425 ntBASIC21.66■■□□□ 1.06
NKX6-1P78426 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX6-1P78426 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX6-1P78426 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.65■■□□□ 1.06
NKX6-1P78426 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX6-1P78426 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX6-1P78426 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX6-1P78426 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX6-1P78426 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NKX6-1P78426 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX6-1P78426 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX6-1P78426 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NKX6-1P78426 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NKX6-1P78426 DRD5P2-201ENST00000421395 2012 ntBASIC21.64■■□□□ 1.05
NKX6-1P78426 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms