Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BX255925.1-201ENST00000566954 1854 ntBASIC17.12■□□□□ 0.33
CKS1BP61024 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CKS1BP61024 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS1BP61024 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CKS1BP61024 RARRES2P7-201ENST00000567349 469 ntBASIC17.11■□□□□ 0.33
CKS1BP61024 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS1BP61024 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.1■□□□□ 0.33
CKS1BP61024 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.1■□□□□ 0.33
CKS1BP61024 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.09■□□□□ 0.33
CKS1BP61024 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CKS1BP61024 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.09■□□□□ 0.33
CKS1BP61024 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.09■□□□□ 0.33
CKS1BP61024 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKS1BP61024 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKS1BP61024 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CKS1BP61024 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.08■□□□□ 0.32
CKS1BP61024 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 AC133561.1-201ENST00000568600 2415 ntBASIC17.08■□□□□ 0.32
CKS1BP61024 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CKS1BP61024 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CKS1BP61024 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.07■□□□□ 0.32
CKS1BP61024 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.07■□□□□ 0.32
CKS1BP61024 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.07■□□□□ 0.32
CKS1BP61024 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.07■□□□□ 0.32
CKS1BP61024 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CKS1BP61024 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CKS1BP61024 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS1BP61024 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS1BP61024 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS1BP61024 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CKS1BP61024 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 SETD8P1-201ENST00000623146 1180 ntBASIC17.05■□□□□ 0.32
CKS1BP61024 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.05■□□□□ 0.32
CKS1BP61024 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CKS1BP61024 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CKS1BP61024 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CKS1BP61024 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CKS1BP61024 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CKS1BP61024 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.04■□□□□ 0.32
CKS1BP61024 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CKS1BP61024 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CKS1BP61024 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.02■□□□□ 0.32
CKS1BP61024 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CKS1BP61024 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS1BP61024 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CKS1BP61024 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS1BP61024 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.01■□□□□ 0.31
CKS1BP61024 AC127502.1-201ENST00000399971 1502 ntBASIC17.01■□□□□ 0.31
CKS1BP61024 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS1BP61024 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms