Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
HCFC1P51610 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.01■■□□□ 1.11
HCFC1P51610 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1P51610 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1P51610 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1P51610 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1P51610 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22■■□□□ 1.11
HCFC1P51610 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1P51610 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1P51610 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1P51610 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1P51610 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1P51610 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC1P51610 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.99■■□□□ 1.11
HCFC1P51610 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1P51610 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1P51610 AC100797.4-201ENST00000631653 1827 ntBASIC21.99■■□□□ 1.11
HCFC1P51610 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1P51610 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1P51610 AC093536.1-201ENST00000569153 554 ntBASIC21.97■■□□□ 1.11
HCFC1P51610 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1P51610 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HCFC1P51610 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.96■■□□□ 1.11
HCFC1P51610 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1P51610 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1P51610 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1P51610 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HCFC1P51610 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1P51610 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
HCFC1P51610 DUX4L9-201ENST00000449051 1259 ntBASIC21.96■■□□□ 1.11
HCFC1P51610 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1P51610 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.95■■□□□ 1.1
HCFC1P51610 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.95■■□□□ 1.1
HCFC1P51610 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.95■■□□□ 1.1
HCFC1P51610 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1P51610 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1P51610 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.94■■□□□ 1.1
HCFC1P51610 SMPD5-203ENST00000639008 1464 ntBASIC21.94■■□□□ 1.1
HCFC1P51610 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1P51610 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1P51610 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.94■■□□□ 1.1
HCFC1P51610 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC1P51610 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HCFC1P51610 RAP2CP1-202ENST00000605179 643 ntBASIC21.94■■□□□ 1.1
HCFC1P51610 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
HCFC1P51610 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1P51610 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1P51610 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1P51610 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HCFC1P51610 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1P51610 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1P51610 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC1P51610 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC1P51610 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.92■■□□□ 1.1
HCFC1P51610 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC1P51610 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.92■■□□□ 1.1
HCFC1P51610 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.91■■□□□ 1.1
HCFC1P51610 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC1P51610 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
HCFC1P51610 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.91■■□□□ 1.1
HCFC1P51610 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HCFC1P51610 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.9■■□□□ 1.1
HCFC1P51610 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 DUX4L18-201ENST00000553347 1267 ntBASIC21.9■■□□□ 1.1
HCFC1P51610 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 ST7-AS1-201ENST00000456775 1889 ntBASIC21.9■■□□□ 1.1
HCFC1P51610 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HCFC1P51610 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.9■■□□□ 1.1
HCFC1P51610 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HCFC1P51610 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.9■■□□□ 1.1
HCFC1P51610 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.9■■□□□ 1.1
HCFC1P51610 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.9■■□□□ 1.1
HCFC1P51610 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1P51610 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.9■■□□□ 1.1
HCFC1P51610 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.9■■□□□ 1.1
HCFC1P51610 AP004833.2-201ENST00000532228 1454 ntBASIC21.9■■□□□ 1.1
HCFC1P51610 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
HCFC1P51610 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HCFC1P51610 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC1P51610 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC1P51610 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC1P51610 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HCFC1P51610 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC1P51610 SPCS2P3-201ENST00000500401 656 ntBASIC21.88■■□□□ 1.09
HCFC1P51610 AL035685.1-201ENST00000636663 812 ntBASIC21.88■■□□□ 1.09
HCFC1P51610 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC1P51610 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC1P51610 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC1P51610 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.87■■□□□ 1.09
HCFC1P51610 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC1P51610 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC1P51610 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC1P51610 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC1P51610 AC026202.3-201ENST00000600805 1127 ntBASIC21.85■■□□□ 1.09
HCFC1P51610 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.85■■□□□ 1.09
HCFC1P51610 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms