Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC142086.6-201ENST00000621154 1765 ntBASIC34.82■■■■□ 3.16
BRD4O60885 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
BRD4O60885 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
BRD4O60885 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
BRD4O60885 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC34.8■■■■□ 3.16
BRD4O60885 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
BRD4O60885 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
BRD4O60885 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
BRD4O60885 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
BRD4O60885 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
BRD4O60885 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
BRD4O60885 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
BRD4O60885 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC34.78■■■■□ 3.16
BRD4O60885 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
BRD4O60885 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
BRD4O60885 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC34.78■■■■□ 3.16
BRD4O60885 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC34.78■■■■□ 3.16
BRD4O60885 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC34.78■■■■□ 3.16
BRD4O60885 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
BRD4O60885 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
BRD4O60885 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
BRD4O60885 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
BRD4O60885 MED25-210ENST00000612854 801 ntTSL 5 BASIC34.77■■■■□ 3.16
BRD4O60885 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
BRD4O60885 MED25-214ENST00000622402 642 ntTSL 5 BASIC34.77■■■■□ 3.16
BRD4O60885 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
BRD4O60885 AL157400.5-201ENST00000507624 621 ntBASIC34.76■■■■□ 3.16
BRD4O60885 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.76■■■■□ 3.16
BRD4O60885 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
BRD4O60885 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
BRD4O60885 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC34.74■■■■□ 3.15
BRD4O60885 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
BRD4O60885 KRT18P60-201ENST00000312876 1297 ntBASIC34.74■■■■□ 3.15
BRD4O60885 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
BRD4O60885 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC34.73■■■■□ 3.15
BRD4O60885 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.73■■■■□ 3.15
BRD4O60885 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
BRD4O60885 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
BRD4O60885 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
BRD4O60885 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC34.72■■■■□ 3.15
BRD4O60885 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC34.72■■■■□ 3.15
BRD4O60885 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC34.71■■■■□ 3.15
BRD4O60885 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC34.71■■■■□ 3.15
BRD4O60885 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC34.71■■■■□ 3.15
BRD4O60885 AL033527.3-201ENST00000566366 1196 ntBASIC34.71■■■■□ 3.15
BRD4O60885 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC34.71■■■■□ 3.15
BRD4O60885 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
BRD4O60885 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.71■■■■□ 3.15
BRD4O60885 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC34.7■■■■□ 3.15
BRD4O60885 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
BRD4O60885 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC34.7■■■■□ 3.15
BRD4O60885 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC34.7■■■■□ 3.15
BRD4O60885 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC34.7■■■■□ 3.15
BRD4O60885 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC34.7■■■■□ 3.14
BRD4O60885 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
BRD4O60885 MOB2-207ENST00000614710 705 ntTSL 5 BASIC34.69■■■■□ 3.14
BRD4O60885 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC34.69■■■■□ 3.14
BRD4O60885 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
BRD4O60885 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
BRD4O60885 TSPY13P-201ENST00000338964 914 ntBASIC34.68■■■■□ 3.14
BRD4O60885 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
BRD4O60885 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
BRD4O60885 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
BRD4O60885 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
BRD4O60885 GFER-205ENST00000569451 517 ntTSL 5 BASIC34.65■■■■□ 3.14
BRD4O60885 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
BRD4O60885 AC100797.4-201ENST00000631653 1827 ntBASIC34.65■■■■□ 3.14
BRD4O60885 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC34.64■■■■□ 3.14
BRD4O60885 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
BRD4O60885 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.64■■■■□ 3.14
BRD4O60885 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
BRD4O60885 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC34.63■■■■□ 3.13
BRD4O60885 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
BRD4O60885 ATP5G2P3-201ENST00000429083 425 ntBASIC34.62■■■■□ 3.13
BRD4O60885 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
BRD4O60885 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC34.62■■■■□ 3.13
BRD4O60885 AC004987.1-201ENST00000428627 508 ntBASIC34.62■■■■□ 3.13
BRD4O60885 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
BRD4O60885 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
BRD4O60885 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
BRD4O60885 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
BRD4O60885 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34.61■■■■□ 3.13
BRD4O60885 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
BRD4O60885 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC34.6■■■■□ 3.13
BRD4O60885 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
BRD4O60885 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
BRD4O60885 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC34.6■■■■□ 3.13
BRD4O60885 AC007029.1-201ENST00000604183 313 ntBASIC34.6■■■■□ 3.13
BRD4O60885 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC34.59■■■■□ 3.13
BRD4O60885 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC34.59■■■■□ 3.13
BRD4O60885 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
BRD4O60885 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
BRD4O60885 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC34.58■■■■□ 3.13
BRD4O60885 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC34.58■■■■□ 3.13
BRD4O60885 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
BRD4O60885 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC34.58■■■■□ 3.13
BRD4O60885 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC34.57■■■■□ 3.12
BRD4O60885 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
BRD4O60885 REST-210ENST00000638187 1334 ntTSL 5 BASIC34.57■■■■□ 3.12
BRD4O60885 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms