Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 MIR3648-2-201ENST00000581792 180 ntBASIC17.68■□□□□ 0.42
PAX4O43316 MIR3648-1-201ENST00000615959 180 ntBASIC17.68■□□□□ 0.42
PAX4O43316 AC018358.1-201ENST00000631079 1402 ntBASIC17.68■□□□□ 0.42
PAX4O43316 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAX4O43316 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PAX4O43316 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PAX4O43316 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PAX4O43316 BX255925.1-201ENST00000566954 1854 ntBASIC17.67■□□□□ 0.42
PAX4O43316 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PAX4O43316 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PAX4O43316 CR559946.2-201ENST00000623684 991 ntBASIC17.67■□□□□ 0.42
PAX4O43316 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PAX4O43316 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAX4O43316 LINC01003-201ENST00000564834 1764 ntBASIC17.66■□□□□ 0.42
PAX4O43316 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAX4O43316 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PAX4O43316 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.66■□□□□ 0.42
PAX4O43316 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PAX4O43316 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAX4O43316 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAX4O43316 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PAX4O43316 AC016575.1-201ENST00000607026 382 ntBASIC17.65■□□□□ 0.42
PAX4O43316 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.65■□□□□ 0.42
PAX4O43316 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAX4O43316 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAX4O43316 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAX4O43316 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
PAX4O43316 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAX4O43316 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PAX4O43316 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAX4O43316 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PAX4O43316 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PAX4O43316 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAX4O43316 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.62■□□□□ 0.41
PAX4O43316 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PAX4O43316 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PAX4O43316 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAX4O43316 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAX4O43316 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAX4O43316 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.62■□□□□ 0.41
PAX4O43316 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAX4O43316 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PAX4O43316 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAX4O43316 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAX4O43316 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAX4O43316 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.61■□□□□ 0.41
PAX4O43316 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAX4O43316 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAX4O43316 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAX4O43316 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAX4O43316 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAX4O43316 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAX4O43316 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAX4O43316 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAX4O43316 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PAX4O43316 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.59■□□□□ 0.41
PAX4O43316 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAX4O43316 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAX4O43316 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.58■□□□□ 0.41
PAX4O43316 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAX4O43316 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAX4O43316 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAX4O43316 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAX4O43316 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.57■□□□□ 0.4
PAX4O43316 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PAX4O43316 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAX4O43316 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PAX4O43316 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAX4O43316 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.56■□□□□ 0.4
PAX4O43316 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAX4O43316 HLA-V-202ENST00000446817 847 ntBASIC17.55■□□□□ 0.4
PAX4O43316 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.55■□□□□ 0.4
PAX4O43316 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PAX4O43316 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.55■□□□□ 0.4
PAX4O43316 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.55■□□□□ 0.4
PAX4O43316 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PAX4O43316 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.54■□□□□ 0.4
PAX4O43316 AC148477.6-201ENST00000623746 465 ntBASIC17.54■□□□□ 0.4
PAX4O43316 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PAX4O43316 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAX4O43316 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PAX4O43316 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAX4O43316 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PAX4O43316 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.54■□□□□ 0.4
PAX4O43316 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAX4O43316 MIR219A2-201ENST00000608502 1504 ntBASIC17.53■□□□□ 0.4
PAX4O43316 MIR639-201ENST00000384974 98 ntBASIC17.53■□□□□ 0.4
PAX4O43316 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PAX4O43316 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PAX4O43316 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAX4O43316 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAX4O43316 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PAX4O43316 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
PAX4O43316 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PAX4O43316 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PAX4O43316 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAX4O43316 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PAX4O43316 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.51■□□□□ 0.39
PAX4O43316 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAX4O43316 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms