Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
FOXN1O15353 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
FOXN1O15353 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30■■■□□ 2.39
FOXN1O15353 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
FOXN1O15353 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.99■■■□□ 2.39
FOXN1O15353 BHLHE23-202ENST00000612929 1109 ntBASIC29.99■■■□□ 2.39
FOXN1O15353 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.99■■■□□ 2.39
FOXN1O15353 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
FOXN1O15353 AC008406.3-201ENST00000620001 1374 ntBASIC29.99■■■□□ 2.39
FOXN1O15353 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
FOXN1O15353 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.98■■■□□ 2.39
FOXN1O15353 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.98■■■□□ 2.39
FOXN1O15353 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
FOXN1O15353 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
FOXN1O15353 AC009831.1-201ENST00000580420 1582 ntBASIC29.98■■■□□ 2.39
FOXN1O15353 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
FOXN1O15353 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
FOXN1O15353 AC133552.2-201ENST00000619106 1032 ntBASIC29.97■■■□□ 2.39
FOXN1O15353 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
FOXN1O15353 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
FOXN1O15353 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.96■■■□□ 2.39
FOXN1O15353 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.95■■■□□ 2.39
FOXN1O15353 AL135925.1-201ENST00000605920 1701 ntBASIC29.95■■■□□ 2.38
FOXN1O15353 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
FOXN1O15353 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
FOXN1O15353 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
FOXN1O15353 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
FOXN1O15353 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
FOXN1O15353 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
FOXN1O15353 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
FOXN1O15353 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
FOXN1O15353 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.94■■■□□ 2.38
FOXN1O15353 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.93■■■□□ 2.38
FOXN1O15353 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
FOXN1O15353 AC103834.1-201ENST00000520383 144 ntBASIC29.92■■■□□ 2.38
FOXN1O15353 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.92■■■□□ 2.38
FOXN1O15353 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
FOXN1O15353 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.91■■■□□ 2.38
FOXN1O15353 YBX1P4-201ENST00000392794 808 ntBASIC29.91■■■□□ 2.38
FOXN1O15353 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
FOXN1O15353 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
FOXN1O15353 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
FOXN1O15353 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
FOXN1O15353 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC29.9■■■□□ 2.38
FOXN1O15353 AC007029.1-201ENST00000604183 313 ntBASIC29.9■■■□□ 2.38
FOXN1O15353 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.9■■■□□ 2.38
FOXN1O15353 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.9■■■□□ 2.38
FOXN1O15353 MIR638-201ENST00000385237 100 ntBASIC29.89■■■□□ 2.38
FOXN1O15353 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
FOXN1O15353 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.88■■■□□ 2.37
FOXN1O15353 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
FOXN1O15353 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
FOXN1O15353 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
FOXN1O15353 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
FOXN1O15353 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
FOXN1O15353 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
FOXN1O15353 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.87■■■□□ 2.37
FOXN1O15353 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC29.86■■■□□ 2.37
FOXN1O15353 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.86■■■□□ 2.37
FOXN1O15353 AC074183.2-201ENST00000623112 922 ntBASIC29.86■■■□□ 2.37
FOXN1O15353 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
FOXN1O15353 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.85■■■□□ 2.37
FOXN1O15353 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC29.85■■■□□ 2.37
FOXN1O15353 MIR219A2-201ENST00000608502 1504 ntBASIC29.85■■■□□ 2.37
FOXN1O15353 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
FOXN1O15353 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
FOXN1O15353 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.84■■■□□ 2.37
FOXN1O15353 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.84■■■□□ 2.37
FOXN1O15353 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.84■■■□□ 2.37
FOXN1O15353 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
FOXN1O15353 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
FOXN1O15353 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
FOXN1O15353 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
FOXN1O15353 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
FOXN1O15353 DUX4L9-201ENST00000449051 1259 ntBASIC29.82■■■□□ 2.36
FOXN1O15353 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
FOXN1O15353 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
FOXN1O15353 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
FOXN1O15353 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.81■■■□□ 2.36
FOXN1O15353 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.81■■■□□ 2.36
FOXN1O15353 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.81■■■□□ 2.36
FOXN1O15353 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
FOXN1O15353 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.8■■■□□ 2.36
FOXN1O15353 AL157400.5-201ENST00000507624 621 ntBASIC29.8■■■□□ 2.36
FOXN1O15353 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
FOXN1O15353 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.78■■■□□ 2.36
FOXN1O15353 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.78■■■□□ 2.36
FOXN1O15353 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
FOXN1O15353 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
FOXN1O15353 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
FOXN1O15353 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.77■■■□□ 2.36
FOXN1O15353 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.76■■■□□ 2.35
FOXN1O15353 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.75■■■□□ 2.35
FOXN1O15353 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.75■■■□□ 2.35
FOXN1O15353 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
FOXN1O15353 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
FOXN1O15353 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.74■■■□□ 2.35
FOXN1O15353 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.74■■■□□ 2.35
FOXN1O15353 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
FOXN1O15353 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms