Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CGB1A6NKQ9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.85■□□□□ 0.77
CGB1A6NKQ9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CGB1A6NKQ9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.84■□□□□ 0.77
CGB1A6NKQ9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CGB1A6NKQ9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CGB1A6NKQ9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CGB1A6NKQ9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CGB1A6NKQ9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CGB1A6NKQ9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.83■□□□□ 0.76
CGB1A6NKQ9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CGB1A6NKQ9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CGB1A6NKQ9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.82■□□□□ 0.76
CGB1A6NKQ9 AL449106.1-201ENST00000608517 1980 ntBASIC19.81■□□□□ 0.76
CGB1A6NKQ9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.81■□□□□ 0.76
CGB1A6NKQ9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.81■□□□□ 0.76
CGB1A6NKQ9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGB1A6NKQ9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.81■□□□□ 0.76
CGB1A6NKQ9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.8■□□□□ 0.76
CGB1A6NKQ9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGB1A6NKQ9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGB1A6NKQ9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CGB1A6NKQ9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.8■□□□□ 0.76
CGB1A6NKQ9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.79■□□□□ 0.76
CGB1A6NKQ9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.78■□□□□ 0.76
CGB1A6NKQ9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.78■□□□□ 0.76
CGB1A6NKQ9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.78■□□□□ 0.76
CGB1A6NKQ9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CGB1A6NKQ9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CGB1A6NKQ9 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.77■□□□□ 0.76
CGB1A6NKQ9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CGB1A6NKQ9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.77■□□□□ 0.76
CGB1A6NKQ9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CGB1A6NKQ9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.76■□□□□ 0.75
CGB1A6NKQ9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.76■□□□□ 0.75
CGB1A6NKQ9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.76■□□□□ 0.75
CGB1A6NKQ9 LINC01971-201ENST00000617888 1048 ntBASIC19.76■□□□□ 0.75
CGB1A6NKQ9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CGB1A6NKQ9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CGB1A6NKQ9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CGB1A6NKQ9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CGB1A6NKQ9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.74■□□□□ 0.75
CGB1A6NKQ9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CGB1A6NKQ9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 AP004609.3-201ENST00000610705 1884 ntBASIC19.73■□□□□ 0.75
CGB1A6NKQ9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 AC091060.1-201ENST00000623524 1766 ntBASIC19.73■□□□□ 0.75
CGB1A6NKQ9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CGB1A6NKQ9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CGB1A6NKQ9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.72■□□□□ 0.75
CGB1A6NKQ9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CGB1A6NKQ9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGB1A6NKQ9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CGB1A6NKQ9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGB1A6NKQ9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGB1A6NKQ9 WHAMMP3-201ENST00000611636 1609 ntBASIC19.71■□□□□ 0.75
CGB1A6NKQ9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CGB1A6NKQ9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGB1A6NKQ9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.71■□□□□ 0.75
CGB1A6NKQ9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CGB1A6NKQ9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CGB1A6NKQ9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L13-201ENST00000554103 1267 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L15-201ENST00000611059 1267 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L23-201ENST00000615195 1269 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L24-201ENST00000617576 1269 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L22-201ENST00000618238 1269 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L20-201ENST00000619712 1269 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L21-201ENST00000622058 1269 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms