Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.18■■□□□ 1.3
HRH3Q9Y5N1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.18■■□□□ 1.3
HRH3Q9Y5N1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
HRH3Q9Y5N1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
HRH3Q9Y5N1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HRH3Q9Y5N1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
HRH3Q9Y5N1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
HRH3Q9Y5N1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.16■■□□□ 1.3
HRH3Q9Y5N1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HRH3Q9Y5N1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.16■■□□□ 1.3
HRH3Q9Y5N1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HRH3Q9Y5N1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HRH3Q9Y5N1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HRH3Q9Y5N1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.14■■□□□ 1.29
HRH3Q9Y5N1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
HRH3Q9Y5N1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HRH3Q9Y5N1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.13■■□□□ 1.29
HRH3Q9Y5N1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HRH3Q9Y5N1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HRH3Q9Y5N1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HRH3Q9Y5N1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.12■■□□□ 1.29
HRH3Q9Y5N1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HRH3Q9Y5N1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HRH3Q9Y5N1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HRH3Q9Y5N1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HRH3Q9Y5N1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HRH3Q9Y5N1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HRH3Q9Y5N1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HRH3Q9Y5N1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HRH3Q9Y5N1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HRH3Q9Y5N1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HRH3Q9Y5N1 GPX1-201ENST00000419349 1106 ntBASIC23.08■■□□□ 1.29
HRH3Q9Y5N1 AP002414.2-202ENST00000590929 1450 ntBASIC23.08■■□□□ 1.29
HRH3Q9Y5N1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.08■■□□□ 1.28
HRH3Q9Y5N1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HRH3Q9Y5N1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HRH3Q9Y5N1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
HRH3Q9Y5N1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HRH3Q9Y5N1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HRH3Q9Y5N1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HRH3Q9Y5N1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.06■■□□□ 1.28
HRH3Q9Y5N1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.06■■□□□ 1.28
HRH3Q9Y5N1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
HRH3Q9Y5N1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
HRH3Q9Y5N1 RARRES2P2-201ENST00000394842 485 ntBASIC23.05■■□□□ 1.28
HRH3Q9Y5N1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HRH3Q9Y5N1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.05■■□□□ 1.28
HRH3Q9Y5N1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
HRH3Q9Y5N1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HRH3Q9Y5N1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HRH3Q9Y5N1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.04■■□□□ 1.28
HRH3Q9Y5N1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HRH3Q9Y5N1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HRH3Q9Y5N1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
HRH3Q9Y5N1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HRH3Q9Y5N1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
HRH3Q9Y5N1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HRH3Q9Y5N1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.01■■□□□ 1.27
HRH3Q9Y5N1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HRH3Q9Y5N1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.01■■□□□ 1.27
HRH3Q9Y5N1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.01■■□□□ 1.27
HRH3Q9Y5N1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HRH3Q9Y5N1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23■■□□□ 1.27
HRH3Q9Y5N1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HRH3Q9Y5N1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HRH3Q9Y5N1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23■■□□□ 1.27
HRH3Q9Y5N1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23■■□□□ 1.27
HRH3Q9Y5N1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23■■□□□ 1.27
HRH3Q9Y5N1 AC135731.1-201ENST00000569415 2548 ntBASIC22.99■■□□□ 1.27
HRH3Q9Y5N1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 AC008813.1-201ENST00000536597 885 ntBASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 RNF126P1-201ENST00000567452 1320 ntBASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HRH3Q9Y5N1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HRH3Q9Y5N1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HRH3Q9Y5N1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms