Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 U85056.1-201ENST00000616429 682 ntBASIC30.15■■■□□ 2.42
DDX4Q9NQI0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
DDX4Q9NQI0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.15■■■□□ 2.42
DDX4Q9NQI0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
DDX4Q9NQI0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
DDX4Q9NQI0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.13■■■□□ 2.41
DDX4Q9NQI0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 ABCB10P3-201ENST00000561950 2166 ntBASIC30.11■■■□□ 2.41
DDX4Q9NQI0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
DDX4Q9NQI0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.11■■■□□ 2.41
DDX4Q9NQI0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.11■■■□□ 2.41
DDX4Q9NQI0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 AL157400.5-201ENST00000507624 621 ntBASIC30.1■■■□□ 2.41
DDX4Q9NQI0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX4Q9NQI0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX4Q9NQI0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.07■■■□□ 2.4
DDX4Q9NQI0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
DDX4Q9NQI0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DDX4Q9NQI0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 ECEL1P2-201ENST00000461596 1295 ntBASIC30.06■■■□□ 2.4
DDX4Q9NQI0 AC012354.3-201ENST00000623734 483 ntBASIC30.06■■■□□ 2.4
DDX4Q9NQI0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.04■■■□□ 2.4
DDX4Q9NQI0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
DDX4Q9NQI0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
DDX4Q9NQI0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 AC018358.1-201ENST00000631079 1402 ntBASIC30.03■■■□□ 2.4
DDX4Q9NQI0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
DDX4Q9NQI0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.02■■■□□ 2.4
DDX4Q9NQI0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.02■■■□□ 2.4
DDX4Q9NQI0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.39
DDX4Q9NQI0 AC126177.7-201ENST00000547904 679 ntBASIC30.01■■■□□ 2.39
DDX4Q9NQI0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
DDX4Q9NQI0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DDX4Q9NQI0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30■■■□□ 2.39
DDX4Q9NQI0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30■■■□□ 2.39
DDX4Q9NQI0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX4Q9NQI0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX4Q9NQI0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX4Q9NQI0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX4Q9NQI0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.97■■■□□ 2.39
DDX4Q9NQI0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
DDX4Q9NQI0 KRT18P60-201ENST00000312876 1297 ntBASIC29.96■■■□□ 2.39
DDX4Q9NQI0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX4Q9NQI0 AL033527.3-201ENST00000566366 1196 ntBASIC29.96■■■□□ 2.39
DDX4Q9NQI0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX4Q9NQI0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
DDX4Q9NQI0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.95■■■□□ 2.39
DDX4Q9NQI0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.95■■■□□ 2.39
DDX4Q9NQI0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
DDX4Q9NQI0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.94■■■□□ 2.38
DDX4Q9NQI0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX4Q9NQI0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX4Q9NQI0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 AL359258.2-201ENST00000564063 1566 ntBASIC29.93■■■□□ 2.38
DDX4Q9NQI0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX4Q9NQI0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
DDX4Q9NQI0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
DDX4Q9NQI0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 AP002414.2-202ENST00000590929 1450 ntBASIC29.9■■■□□ 2.38
DDX4Q9NQI0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms