Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC018358.1-201ENST00000631079 1402 ntBASIC20.29■□□□□ 0.84
RAB40CQ96S21 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40CQ96S21 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40CQ96S21 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAB40CQ96S21 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40CQ96S21 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB40CQ96S21 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB40CQ96S21 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40CQ96S21 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RAB40CQ96S21 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40CQ96S21 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40CQ96S21 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40CQ96S21 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RAB40CQ96S21 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40CQ96S21 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB40CQ96S21 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB40CQ96S21 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40CQ96S21 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB40CQ96S21 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40CQ96S21 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40CQ96S21 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB40CQ96S21 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAB40CQ96S21 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAB40CQ96S21 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAB40CQ96S21 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40CQ96S21 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAB40CQ96S21 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40CQ96S21 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40CQ96S21 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40CQ96S21 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.24■□□□□ 0.83
RAB40CQ96S21 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40CQ96S21 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB40CQ96S21 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40CQ96S21 SETD8P1-201ENST00000623146 1180 ntBASIC20.23■□□□□ 0.83
RAB40CQ96S21 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40CQ96S21 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40CQ96S21 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB40CQ96S21 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40CQ96S21 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40CQ96S21 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40CQ96S21 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAB40CQ96S21 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB40CQ96S21 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40CQ96S21 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB40CQ96S21 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB40CQ96S21 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40CQ96S21 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40CQ96S21 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40CQ96S21 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB40CQ96S21 DUSP8P4-201ENST00000399538 1761 ntBASIC20.19■□□□□ 0.82
RAB40CQ96S21 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40CQ96S21 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RAB40CQ96S21 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB40CQ96S21 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40CQ96S21 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB40CQ96S21 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40CQ96S21 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40CQ96S21 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40CQ96S21 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
RAB40CQ96S21 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40CQ96S21 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40CQ96S21 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40CQ96S21 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40CQ96S21 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40CQ96S21 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RAB40CQ96S21 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB40CQ96S21 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB40CQ96S21 AC092803.2-201ENST00000564287 1899 ntBASIC20.16■□□□□ 0.82
RAB40CQ96S21 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40CQ96S21 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40CQ96S21 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40CQ96S21 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40CQ96S21 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40CQ96S21 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAB40CQ96S21 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40CQ96S21 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40CQ96S21 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
RAB40CQ96S21 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40CQ96S21 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40CQ96S21 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40CQ96S21 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40CQ96S21 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.12■□□□□ 0.81
RAB40CQ96S21 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RAB40CQ96S21 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RAB40CQ96S21 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40CQ96S21 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40CQ96S21 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RAB40CQ96S21 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB40CQ96S21 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40CQ96S21 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB40CQ96S21 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB40CQ96S21 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RAB40CQ96S21 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40CQ96S21 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms