Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 DUX4L15-201ENST00000611059 1267 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L11-201ENST00000611504 1267 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L12-201ENST00000614593 1267 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L23-201ENST00000615195 1269 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L24-201ENST00000617576 1269 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L22-201ENST00000618238 1269 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L20-201ENST00000619712 1269 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L14-201ENST00000621227 1267 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L21-201ENST00000622058 1269 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L10-201ENST00000622460 1267 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 DUX4L25-201ENST00000624915 1269 ntBASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CDRT4Q8N9R6 ABHD17AP4-201ENST00000411545 909 ntBASIC23.41■■□□□ 1.34
CDRT4Q8N9R6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDRT4Q8N9R6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDRT4Q8N9R6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDRT4Q8N9R6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDRT4Q8N9R6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
CDRT4Q8N9R6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CDRT4Q8N9R6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDRT4Q8N9R6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.39■■□□□ 1.33
CDRT4Q8N9R6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDRT4Q8N9R6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CDRT4Q8N9R6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDRT4Q8N9R6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDRT4Q8N9R6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDRT4Q8N9R6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDRT4Q8N9R6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CDRT4Q8N9R6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDRT4Q8N9R6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.36■■□□□ 1.33
CDRT4Q8N9R6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDRT4Q8N9R6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDRT4Q8N9R6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.36■■□□□ 1.33
CDRT4Q8N9R6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDRT4Q8N9R6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDRT4Q8N9R6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.35■■□□□ 1.33
CDRT4Q8N9R6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDRT4Q8N9R6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDRT4Q8N9R6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CDRT4Q8N9R6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CDRT4Q8N9R6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDRT4Q8N9R6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDRT4Q8N9R6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDRT4Q8N9R6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDRT4Q8N9R6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.32■■□□□ 1.32
CDRT4Q8N9R6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.32■■□□□ 1.32
CDRT4Q8N9R6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.32■■□□□ 1.32
CDRT4Q8N9R6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CDRT4Q8N9R6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 AL121749.1-202ENST00000609313 2153 ntBASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDRT4Q8N9R6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDRT4Q8N9R6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDRT4Q8N9R6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDRT4Q8N9R6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.3■■□□□ 1.32
CDRT4Q8N9R6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDRT4Q8N9R6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.29■■□□□ 1.32
CDRT4Q8N9R6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 AC008813.1-201ENST00000536597 885 ntBASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDRT4Q8N9R6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CDRT4Q8N9R6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.27■■□□□ 1.32
CDRT4Q8N9R6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDRT4Q8N9R6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDRT4Q8N9R6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDRT4Q8N9R6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDRT4Q8N9R6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDRT4Q8N9R6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.26■■□□□ 1.31
CDRT4Q8N9R6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDRT4Q8N9R6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDRT4Q8N9R6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDRT4Q8N9R6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDRT4Q8N9R6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDRT4Q8N9R6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDRT4Q8N9R6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.23■■□□□ 1.31
CDRT4Q8N9R6 CR559946.2-201ENST00000623684 991 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms