Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CCDC30Q5VVM6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCDC30Q5VVM6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.37■■■□□ 2.77
CCDC30Q5VVM6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC30Q5VVM6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC30Q5VVM6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC30Q5VVM6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC30Q5VVM6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC30Q5VVM6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 HSD17B1P1-201ENST00000590052 955 ntBASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC30Q5VVM6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.32■■■□□ 2.77
CCDC30Q5VVM6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
CCDC30Q5VVM6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC30Q5VVM6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.32■■■□□ 2.76
CCDC30Q5VVM6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC30Q5VVM6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.31■■■□□ 2.76
CCDC30Q5VVM6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC30Q5VVM6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 DRD5P2-201ENST00000421395 2012 ntBASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC30Q5VVM6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC30Q5VVM6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC30Q5VVM6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC30Q5VVM6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CCDC30Q5VVM6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
CCDC30Q5VVM6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
CCDC30Q5VVM6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
CCDC30Q5VVM6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
CCDC30Q5VVM6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC30Q5VVM6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.26■■■□□ 2.75
CCDC30Q5VVM6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
CCDC30Q5VVM6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
CCDC30Q5VVM6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.25■■■□□ 2.75
CCDC30Q5VVM6 GPX1-201ENST00000419349 1106 ntBASIC32.24■■■□□ 2.75
CCDC30Q5VVM6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.24■■■□□ 2.75
CCDC30Q5VVM6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC30Q5VVM6 AC018358.1-201ENST00000631079 1402 ntBASIC32.23■■■□□ 2.75
CCDC30Q5VVM6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
CCDC30Q5VVM6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.23■■■□□ 2.75
CCDC30Q5VVM6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.22■■■□□ 2.75
CCDC30Q5VVM6 AC022413.1-201ENST00000624602 984 ntBASIC32.22■■■□□ 2.75
CCDC30Q5VVM6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC30Q5VVM6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CCDC30Q5VVM6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.19■■■□□ 2.74
CCDC30Q5VVM6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.19■■■□□ 2.74
CCDC30Q5VVM6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CCDC30Q5VVM6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
CCDC30Q5VVM6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.19■■■□□ 2.74
CCDC30Q5VVM6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
CCDC30Q5VVM6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CCDC30Q5VVM6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.18■■■□□ 2.74
CCDC30Q5VVM6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CCDC30Q5VVM6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.17■■■□□ 2.74
CCDC30Q5VVM6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
CCDC30Q5VVM6 AC060814.1-201ENST00000554326 538 ntBASIC32.15■■■□□ 2.74
CCDC30Q5VVM6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.15■■■□□ 2.74
CCDC30Q5VVM6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CCDC30Q5VVM6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CCDC30Q5VVM6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.14■■■□□ 2.74
CCDC30Q5VVM6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.14■■■□□ 2.74
CCDC30Q5VVM6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CCDC30Q5VVM6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.13■■■□□ 2.73
CCDC30Q5VVM6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.13■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms