Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VMA21Q3ZAQ7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VMA21Q3ZAQ7 RPS2P35-201ENST00000443417 897 ntBASIC20.21■□□□□ 0.83
VMA21Q3ZAQ7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.21■□□□□ 0.83
VMA21Q3ZAQ7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.21■□□□□ 0.83
VMA21Q3ZAQ7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VMA21Q3ZAQ7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VMA21Q3ZAQ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VMA21Q3ZAQ7 AC110285.7-201ENST00000624417 1536 ntBASIC20.19■□□□□ 0.82
VMA21Q3ZAQ7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VMA21Q3ZAQ7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VMA21Q3ZAQ7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VMA21Q3ZAQ7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VMA21Q3ZAQ7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.17■□□□□ 0.82
VMA21Q3ZAQ7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VMA21Q3ZAQ7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VMA21Q3ZAQ7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
VMA21Q3ZAQ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.17■□□□□ 0.82
VMA21Q3ZAQ7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.16■□□□□ 0.82
VMA21Q3ZAQ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VMA21Q3ZAQ7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VMA21Q3ZAQ7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.16■□□□□ 0.82
VMA21Q3ZAQ7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VMA21Q3ZAQ7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.16■□□□□ 0.82
VMA21Q3ZAQ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VMA21Q3ZAQ7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VMA21Q3ZAQ7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
VMA21Q3ZAQ7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VMA21Q3ZAQ7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VMA21Q3ZAQ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VMA21Q3ZAQ7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
VMA21Q3ZAQ7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VMA21Q3ZAQ7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VMA21Q3ZAQ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VMA21Q3ZAQ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VMA21Q3ZAQ7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.11■□□□□ 0.81
VMA21Q3ZAQ7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.1■□□□□ 0.81
VMA21Q3ZAQ7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 LINC01971-201ENST00000617888 1048 ntBASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
VMA21Q3ZAQ7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VMA21Q3ZAQ7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VMA21Q3ZAQ7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VMA21Q3ZAQ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.08■□□□□ 0.81
VMA21Q3ZAQ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
VMA21Q3ZAQ7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VMA21Q3ZAQ7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.07■□□□□ 0.8
VMA21Q3ZAQ7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VMA21Q3ZAQ7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VMA21Q3ZAQ7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VMA21Q3ZAQ7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VMA21Q3ZAQ7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VMA21Q3ZAQ7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VMA21Q3ZAQ7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.06■□□□□ 0.8
VMA21Q3ZAQ7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.06■□□□□ 0.8
VMA21Q3ZAQ7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
VMA21Q3ZAQ7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms