Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHROOM1Q2M3G4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.78■■■□□ 2.36
SHROOM1Q2M3G4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHROOM1Q2M3G4 ABCB10P3-201ENST00000561950 2166 ntBASIC29.77■■■□□ 2.36
SHROOM1Q2M3G4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.77■■■□□ 2.36
SHROOM1Q2M3G4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SHROOM1Q2M3G4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.77■■■□□ 2.36
SHROOM1Q2M3G4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.77■■■□□ 2.36
SHROOM1Q2M3G4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
SHROOM1Q2M3G4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SHROOM1Q2M3G4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHROOM1Q2M3G4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHROOM1Q2M3G4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SHROOM1Q2M3G4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SHROOM1Q2M3G4 AL157400.5-201ENST00000507624 621 ntBASIC29.74■■■□□ 2.35
SHROOM1Q2M3G4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.74■■■□□ 2.35
SHROOM1Q2M3G4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.74■■■□□ 2.35
SHROOM1Q2M3G4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SHROOM1Q2M3G4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.74■■■□□ 2.35
SHROOM1Q2M3G4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.73■■■□□ 2.35
SHROOM1Q2M3G4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.73■■■□□ 2.35
SHROOM1Q2M3G4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SHROOM1Q2M3G4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SHROOM1Q2M3G4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.73■■■□□ 2.35
SHROOM1Q2M3G4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.71■■■□□ 2.35
SHROOM1Q2M3G4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.71■■■□□ 2.35
SHROOM1Q2M3G4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SHROOM1Q2M3G4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SHROOM1Q2M3G4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SHROOM1Q2M3G4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SHROOM1Q2M3G4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHROOM1Q2M3G4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.68■■■□□ 2.34
SHROOM1Q2M3G4 AC018358.1-201ENST00000631079 1402 ntBASIC29.68■■■□□ 2.34
SHROOM1Q2M3G4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SHROOM1Q2M3G4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHROOM1Q2M3G4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SHROOM1Q2M3G4 AC012354.3-201ENST00000623734 483 ntBASIC29.67■■■□□ 2.34
SHROOM1Q2M3G4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHROOM1Q2M3G4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.66■■■□□ 2.34
SHROOM1Q2M3G4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM1Q2M3G4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM1Q2M3G4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
SHROOM1Q2M3G4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM1Q2M3G4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM1Q2M3G4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.65■■■□□ 2.34
SHROOM1Q2M3G4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM1Q2M3G4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.65■■■□□ 2.34
SHROOM1Q2M3G4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
SHROOM1Q2M3G4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.64■■■□□ 2.34
SHROOM1Q2M3G4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM1Q2M3G4 AL033527.3-201ENST00000566366 1196 ntBASIC29.63■■■□□ 2.33
SHROOM1Q2M3G4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM1Q2M3G4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM1Q2M3G4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.63■■■□□ 2.33
SHROOM1Q2M3G4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM1Q2M3G4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 KRT18P60-201ENST00000312876 1297 ntBASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 ECEL1P2-201ENST00000461596 1295 ntBASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.61■■■□□ 2.33
SHROOM1Q2M3G4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SHROOM1Q2M3G4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SHROOM1Q2M3G4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SHROOM1Q2M3G4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.58■■■□□ 2.33
SHROOM1Q2M3G4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.58■■■□□ 2.33
SHROOM1Q2M3G4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
SHROOM1Q2M3G4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SHROOM1Q2M3G4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SHROOM1Q2M3G4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SHROOM1Q2M3G4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SHROOM1Q2M3G4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SHROOM1Q2M3G4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SHROOM1Q2M3G4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SHROOM1Q2M3G4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
SHROOM1Q2M3G4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SHROOM1Q2M3G4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
SHROOM1Q2M3G4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.56■■■□□ 2.32
SHROOM1Q2M3G4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
SHROOM1Q2M3G4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.55■■■□□ 2.32
SHROOM1Q2M3G4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SHROOM1Q2M3G4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.54■■■□□ 2.32
SHROOM1Q2M3G4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.54■■■□□ 2.32
SHROOM1Q2M3G4 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.54■■■□□ 2.32
SHROOM1Q2M3G4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SHROOM1Q2M3G4 AL359258.2-201ENST00000564063 1566 ntBASIC29.53■■■□□ 2.32
SHROOM1Q2M3G4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SHROOM1Q2M3G4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SHROOM1Q2M3G4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SHROOM1Q2M3G4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.52■■■□□ 2.32
SHROOM1Q2M3G4 AC126177.7-201ENST00000547904 679 ntBASIC29.52■■■□□ 2.32
SHROOM1Q2M3G4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms