Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
CCR9P51686 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCR9P51686 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CCR9P51686 WHAMMP2-203ENST00000563942 1603 ntBASIC22.06■■□□□ 1.12
CCR9P51686 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.06■■□□□ 1.12
CCR9P51686 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCR9P51686 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCR9P51686 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCR9P51686 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCR9P51686 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCR9P51686 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCR9P51686 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.04■■□□□ 1.12
CCR9P51686 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.04■■□□□ 1.12
CCR9P51686 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCR9P51686 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.04■■□□□ 1.12
CCR9P51686 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CCR9P51686 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.04■■□□□ 1.12
CCR9P51686 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCR9P51686 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.03■■□□□ 1.12
CCR9P51686 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCR9P51686 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CCR9P51686 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CCR9P51686 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCR9P51686 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.03■■□□□ 1.12
CCR9P51686 LINC00273-201ENST00000539813 1452 ntBASIC22.03■■□□□ 1.12
CCR9P51686 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCR9P51686 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCR9P51686 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCR9P51686 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CCR9P51686 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCR9P51686 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCR9P51686 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CCR9P51686 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCR9P51686 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCR9P51686 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCR9P51686 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCR9P51686 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCR9P51686 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CCR9P51686 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCR9P51686 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22■■□□□ 1.11
CCR9P51686 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCR9P51686 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCR9P51686 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.99■■□□□ 1.11
CCR9P51686 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCR9P51686 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCR9P51686 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.98■■□□□ 1.11
CCR9P51686 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCR9P51686 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCR9P51686 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCR9P51686 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCR9P51686 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.97■■□□□ 1.11
CCR9P51686 SUZ12P1-203ENST00000578195 985 ntBASIC21.97■■□□□ 1.11
CCR9P51686 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCR9P51686 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCR9P51686 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCR9P51686 MIR6090-201ENST00000622481 60 ntBASIC21.96■■□□□ 1.11
CCR9P51686 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCR9P51686 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCR9P51686 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.96■■□□□ 1.11
CCR9P51686 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCR9P51686 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCR9P51686 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCR9P51686 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCR9P51686 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCR9P51686 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCR9P51686 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCR9P51686 AC091060.1-201ENST00000623524 1766 ntBASIC21.94■■□□□ 1.1
CCR9P51686 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.94■■□□□ 1.1
CCR9P51686 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCR9P51686 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCR9P51686 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCR9P51686 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.93■■□□□ 1.1
CCR9P51686 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.93■■□□□ 1.1
CCR9P51686 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.93■■□□□ 1.1
CCR9P51686 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCR9P51686 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCR9P51686 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCR9P51686 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCR9P51686 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCR9P51686 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCR9P51686 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.9■■□□□ 1.1
CCR9P51686 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCR9P51686 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.89■■□□□ 1.09
CCR9P51686 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
CCR9P51686 DUX4L28-201ENST00000623687 678 ntBASIC21.88■■□□□ 1.09
CCR9P51686 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.88■■□□□ 1.09
CCR9P51686 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CCR9P51686 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCR9P51686 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCR9P51686 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.87■■□□□ 1.09
CCR9P51686 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCR9P51686 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms