Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
NDUFS3O75489 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.04■■□□□ 1.6
NDUFS3O75489 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.04■■□□□ 1.6
NDUFS3O75489 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NDUFS3O75489 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
NDUFS3O75489 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
NDUFS3O75489 ZNRF2P2-203ENST00000454624 420 ntBASIC25.03■■□□□ 1.6
NDUFS3O75489 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.03■■□□□ 1.6
NDUFS3O75489 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NDUFS3O75489 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
NDUFS3O75489 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NDUFS3O75489 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDUFS3O75489 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.02■■□□□ 1.6
NDUFS3O75489 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDUFS3O75489 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NDUFS3O75489 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NDUFS3O75489 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.01■■□□□ 1.59
NDUFS3O75489 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
NDUFS3O75489 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
NDUFS3O75489 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
NDUFS3O75489 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25■■□□□ 1.59
NDUFS3O75489 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25■■□□□ 1.59
NDUFS3O75489 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NDUFS3O75489 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
NDUFS3O75489 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.99■■□□□ 1.59
NDUFS3O75489 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NDUFS3O75489 ABHD17AP4-201ENST00000411545 909 ntBASIC24.98■■□□□ 1.59
NDUFS3O75489 DUX4L11-201ENST00000611504 1267 ntBASIC24.98■■□□□ 1.59
NDUFS3O75489 DUX4L12-201ENST00000614593 1267 ntBASIC24.98■■□□□ 1.59
NDUFS3O75489 DUX4L14-201ENST00000621227 1267 ntBASIC24.98■■□□□ 1.59
NDUFS3O75489 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NDUFS3O75489 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L13-201ENST00000554103 1267 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L15-201ENST00000611059 1267 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L23-201ENST00000615195 1269 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L24-201ENST00000617576 1269 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L22-201ENST00000618238 1269 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L20-201ENST00000619712 1269 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L21-201ENST00000622058 1269 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L10-201ENST00000622460 1267 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 DUX4L25-201ENST00000624915 1269 ntBASIC24.97■■□□□ 1.59
NDUFS3O75489 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NDUFS3O75489 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
NDUFS3O75489 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NDUFS3O75489 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NDUFS3O75489 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NDUFS3O75489 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NDUFS3O75489 AL121749.1-202ENST00000609313 2153 ntBASIC24.95■■□□□ 1.58
NDUFS3O75489 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NDUFS3O75489 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NDUFS3O75489 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NDUFS3O75489 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NDUFS3O75489 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NDUFS3O75489 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
NDUFS3O75489 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NDUFS3O75489 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.93■■□□□ 1.58
NDUFS3O75489 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
NDUFS3O75489 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NDUFS3O75489 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NDUFS3O75489 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.92■■□□□ 1.58
NDUFS3O75489 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
NDUFS3O75489 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NDUFS3O75489 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NDUFS3O75489 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
NDUFS3O75489 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NDUFS3O75489 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NDUFS3O75489 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NDUFS3O75489 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.9■■□□□ 1.58
NDUFS3O75489 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
NDUFS3O75489 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NDUFS3O75489 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NDUFS3O75489 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.9■■□□□ 1.58
NDUFS3O75489 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NDUFS3O75489 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NDUFS3O75489 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
NDUFS3O75489 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NDUFS3O75489 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.88■■□□□ 1.57
NDUFS3O75489 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.88■■□□□ 1.57
NDUFS3O75489 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
NDUFS3O75489 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NDUFS3O75489 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
NDUFS3O75489 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NDUFS3O75489 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.87■■□□□ 1.57
NDUFS3O75489 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
NDUFS3O75489 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.87■■□□□ 1.57
NDUFS3O75489 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NDUFS3O75489 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NDUFS3O75489 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NDUFS3O75489 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.86■■□□□ 1.57
NDUFS3O75489 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NDUFS3O75489 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
NDUFS3O75489 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
NDUFS3O75489 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NDUFS3O75489 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
NDUFS3O75489 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.85■■□□□ 1.57
NDUFS3O75489 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NDUFS3O75489 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NDUFS3O75489 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.84■■□□□ 1.57
NDUFS3O75489 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.84■■□□□ 1.57
NDUFS3O75489 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms