Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AC007029.1-201ENST00000604183 313 ntBASIC29.44■■■□□ 2.3
LOC285556D6RIA3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LOC285556D6RIA3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LOC285556D6RIA3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
LOC285556D6RIA3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LOC285556D6RIA3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.42■■■□□ 2.3
LOC285556D6RIA3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LOC285556D6RIA3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
LOC285556D6RIA3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.42■■■□□ 2.3
LOC285556D6RIA3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.42■■■□□ 2.3
LOC285556D6RIA3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.42■■■□□ 2.3
LOC285556D6RIA3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC285556D6RIA3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.41■■■□□ 2.3
LOC285556D6RIA3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC285556D6RIA3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC285556D6RIA3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC285556D6RIA3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC285556D6RIA3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LOC285556D6RIA3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LOC285556D6RIA3 ATP5G2P3-201ENST00000429083 425 ntBASIC29.39■■■□□ 2.3
LOC285556D6RIA3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.39■■■□□ 2.3
LOC285556D6RIA3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.39■■■□□ 2.3
LOC285556D6RIA3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.39■■■□□ 2.3
LOC285556D6RIA3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
LOC285556D6RIA3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
LOC285556D6RIA3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.39■■■□□ 2.29
LOC285556D6RIA3 ST7-AS1-201ENST00000456775 1889 ntBASIC29.38■■■□□ 2.29
LOC285556D6RIA3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LOC285556D6RIA3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.38■■■□□ 2.29
LOC285556D6RIA3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LOC285556D6RIA3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LOC285556D6RIA3 AP004833.2-201ENST00000532228 1454 ntBASIC29.38■■■□□ 2.29
LOC285556D6RIA3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.37■■■□□ 2.29
LOC285556D6RIA3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.37■■■□□ 2.29
LOC285556D6RIA3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
LOC285556D6RIA3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
LOC285556D6RIA3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LOC285556D6RIA3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LOC285556D6RIA3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.35■■■□□ 2.29
LOC285556D6RIA3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.35■■■□□ 2.29
LOC285556D6RIA3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LOC285556D6RIA3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LOC285556D6RIA3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LOC285556D6RIA3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.34■■■□□ 2.29
LOC285556D6RIA3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LOC285556D6RIA3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.34■■■□□ 2.29
LOC285556D6RIA3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
LOC285556D6RIA3 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.33■■■□□ 2.29
LOC285556D6RIA3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
LOC285556D6RIA3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.33■■■□□ 2.29
LOC285556D6RIA3 AC100797.4-201ENST00000631653 1827 ntBASIC29.32■■■□□ 2.28
LOC285556D6RIA3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LOC285556D6RIA3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LOC285556D6RIA3 RARRES2P1-201ENST00000474487 481 ntBASIC29.32■■■□□ 2.28
LOC285556D6RIA3 AL592293.1-201ENST00000502889 1188 ntBASIC29.32■■■□□ 2.28
LOC285556D6RIA3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LOC285556D6RIA3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.32■■■□□ 2.28
LOC285556D6RIA3 AC025884.2-201ENST00000553429 711 ntBASIC29.31■■■□□ 2.28
LOC285556D6RIA3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.31■■■□□ 2.28
LOC285556D6RIA3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LOC285556D6RIA3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
LOC285556D6RIA3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
LOC285556D6RIA3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LOC285556D6RIA3 AC129492.7-201ENST00000622992 756 ntBASIC29.31■■■□□ 2.28
LOC285556D6RIA3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.3■■■□□ 2.28
LOC285556D6RIA3 AC009831.1-201ENST00000580420 1582 ntBASIC29.3■■■□□ 2.28
LOC285556D6RIA3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
LOC285556D6RIA3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
LOC285556D6RIA3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
LOC285556D6RIA3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
LOC285556D6RIA3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
LOC285556D6RIA3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.28■■■□□ 2.28
LOC285556D6RIA3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
LOC285556D6RIA3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
LOC285556D6RIA3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.28■■■□□ 2.28
LOC285556D6RIA3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LOC285556D6RIA3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.27■■■□□ 2.28
LOC285556D6RIA3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LOC285556D6RIA3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LOC285556D6RIA3 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.26■■■□□ 2.27
LOC285556D6RIA3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
LOC285556D6RIA3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LOC285556D6RIA3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LOC285556D6RIA3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
LOC285556D6RIA3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
LOC285556D6RIA3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.23■■■□□ 2.27
LOC285556D6RIA3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
LOC285556D6RIA3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LOC285556D6RIA3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
LOC285556D6RIA3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
LOC285556D6RIA3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
LOC285556D6RIA3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
LOC285556D6RIA3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.2■■■□□ 2.26
LOC285556D6RIA3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
LOC285556D6RIA3 AC133552.2-201ENST00000619106 1032 ntBASIC29.19■■■□□ 2.26
LOC285556D6RIA3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.18■■■□□ 2.26
LOC285556D6RIA3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
LOC285556D6RIA3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
LOC285556D6RIA3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
LOC285556D6RIA3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms