Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.84■■■□□ 2.21
SPDYE3A6NKU9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SPDYE3A6NKU9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPDYE3A6NKU9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPDYE3A6NKU9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPDYE3A6NKU9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SPDYE3A6NKU9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.77■■■□□ 2.2
SPDYE3A6NKU9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SPDYE3A6NKU9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 DRD5P2-201ENST00000421395 2012 ntBASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SPDYE3A6NKU9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
SPDYE3A6NKU9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SPDYE3A6NKU9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
SPDYE3A6NKU9 HSD17B1P1-201ENST00000590052 955 ntBASIC28.73■■■□□ 2.19
SPDYE3A6NKU9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SPDYE3A6NKU9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SPDYE3A6NKU9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPDYE3A6NKU9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SPDYE3A6NKU9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.7■■■□□ 2.18
SPDYE3A6NKU9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
SPDYE3A6NKU9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
SPDYE3A6NKU9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SPDYE3A6NKU9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.69■■■□□ 2.18
SPDYE3A6NKU9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SPDYE3A6NKU9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 AC018358.1-201ENST00000631079 1402 ntBASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 GPX1-201ENST00000419349 1106 ntBASIC28.67■■■□□ 2.18
SPDYE3A6NKU9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.67■■■□□ 2.18
SPDYE3A6NKU9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.67■■■□□ 2.18
SPDYE3A6NKU9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 AC022413.1-201ENST00000624602 984 ntBASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.65■■■□□ 2.18
SPDYE3A6NKU9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.65■■■□□ 2.18
SPDYE3A6NKU9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.63■■■□□ 2.17
SPDYE3A6NKU9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 AC126177.7-201ENST00000547904 679 ntBASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms