RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17bsnR17b SGS1P35187 1447 aa7.7□□□□□ -1.18
snR17bsnR17b SPA2P23201 1466 aaKnown RBP7.61□□□□□ -1.19
snR17bsnR17b SSN2P38931 1420 aa7.54□□□□□ -1.2
snR17bsnR17b DRS1P32892 752 aaKnown RBP7.38□□□□□ -1.23
snR17bsnR17b INO80P53115 1489 aa7.36□□□□□ -1.23
snR17bsnR17b SKI3P17883 1432 aaKnown RBP7.18□□□□□ -1.26
snR17bsnR17b TCB3Q03640 1545 aaKnown RBP7.11□□□□□ -1.27
snR17bsnR17b NOP2P40991 618 aaKnown RBP6.98□□□□□ -1.29
snR17bsnR17b MTC1P47018 478 aaKnown RBP6.96□□□□□ -1.3
snR17bsnR17b MMS22Q06164 1454 aa6.94□□□□□ -1.3
snR17bsnR17b NSR1P27476 414 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
snR17bsnR17b HSL1P34244 1518 aa6.93□□□□□ -1.3
snR17bsnR17b SPT6P23615 1451 aaKnown RBP6.92□□□□□ -1.3
snR17bsnR17b CHD1P32657 1468 aa6.92□□□□□ -1.3
snR17bsnR17b TY1B-DR4Q07793 1604 aa6.92□□□□□ -1.3
snR17bsnR17b XRN1P22147 1528 aaKnown RBP6.89□□□□□ -1.31
snR17bsnR17b RSE1Q04693 1361 aaKnown RBP6.84□□□□□ -1.31
snR17bsnR17b HIR3P47171 1648 aa6.84□□□□□ -1.31
snR17bsnR17b FAP1P53971 965 aa6.82□□□□□ -1.32
snR17bsnR17b REV3P14284 1504 aa6.8□□□□□ -1.32
snR17bsnR17b TAF2P23255 1407 aa6.79□□□□□ -1.32
snR17bsnR17b SAS10Q12136 610 aaPredicted RBP6.79□□□□□ -1.32
snR17bsnR17b UFD4P33202 1483 aa6.77□□□□□ -1.33
snR17bsnR17b SIN3P22579 1536 aa6.74□□□□□ -1.33
snR17bsnR17b TRM732Q03496 1420 aa6.74□□□□□ -1.33
snR17bsnR17b THO2P53552 1597 aaKnown RBP6.73□□□□□ -1.33
snR17bsnR17b IKI3Q06706 1349 aaKnown RBP6.73□□□□□ -1.33
snR17bsnR17b YTA7P40340 1379 aa6.72□□□□□ -1.33
snR17bsnR17b SSK2P53599 1579 aa6.72□□□□□ -1.33
snR17bsnR17b STU1P38198 1513 aa6.71□□□□□ -1.34
snR17bsnR17b POL1P13382 1468 aa6.68□□□□□ -1.34
snR17bsnR17b SPP41P38904 1435 aa6.67□□□□□ -1.34
snR17bsnR17b BFR2Q06631 534 aaKnown RBP6.67□□□□□ -1.34
snR17bsnR17b ENP1P38333 483 aaKnown RBP6.66□□□□□ -1.34
snR17bsnR17b BPT1P14772 1559 aa6.65□□□□□ -1.35
snR17bsnR17b MYO2P19524 1574 aaKnown RBP6.65□□□□□ -1.35
snR17bsnR17b SSM4P40318 1319 aa6.64□□□□□ -1.35
snR17bsnR17b SWR1Q05471 1514 aa6.64□□□□□ -1.35
snR17bsnR17b SCC2Q04002 1493 aa6.62□□□□□ -1.35
snR17bsnR17b POL5P39985 1022 aaKnown RBP6.62□□□□□ -1.35
snR17bsnR17b ESP1Q03018 1630 aa6.6□□□□□ -1.35
snR17bsnR17b ECM5Q03214 1411 aa6.59□□□□□ -1.35
snR17bsnR17b TAF7Q05021 590 aa6.59□□□□□ -1.35
snR17bsnR17b DNA2P38859 1522 aa6.57□□□□□ -1.36
snR17bsnR17b BUD4P47136 1447 aa6.56□□□□□ -1.36
snR17bsnR17b SPT7P35177 1332 aa6.55□□□□□ -1.36
snR17bsnR17b MYO4P32492 1471 aa6.55□□□□□ -1.36
snR17bsnR17b YOR1P53049 1477 aa6.55□□□□□ -1.36
snR17bsnR17b YPK9Q12697 1472 aa6.55□□□□□ -1.36
snR17bsnR17b MON2P48563 1636 aaPredicted RBP6.55□□□□□ -1.36
snR17bsnR17b STH1P32597 1359 aa6.55□□□□□ -1.36
snR17bsnR17b RTT106P40161 455 aa6.54□□□□□ -1.36
snR17bsnR17b NUP170P38181 1502 aa6.54□□□□□ -1.36
snR17bsnR17b IFH1P39520 1085 aa6.53□□□□□ -1.36
snR17bsnR17b RKR1Q04781 1562 aa6.51□□□□□ -1.37
snR17bsnR17b SEC3P33332 1336 aaKnown RBP6.5□□□□□ -1.37
snR17bsnR17b SMC4Q12267 1418 aa6.5□□□□□ -1.37
snR17bsnR17b SNQ2P32568 1501 aaKnown RBP6.5□□□□□ -1.37
snR17bsnR17b PAN1P32521 1480 aa6.48□□□□□ -1.37
snR17bsnR17b TSC11P40061 1430 aa6.47□□□□□ -1.37
snR17bsnR17b GEA1P47102 1408 aaPredicted RBP6.47□□□□□ -1.37
snR17bsnR17b PRS1P32895 427 aaKnown RBP6.46□□□□□ -1.38
snR17bsnR17b TOP2P06786 1428 aaKnown RBP6.45□□□□□ -1.38
snR17bsnR17b ATG2P53855 1592 aa6.44□□□□□ -1.38
snR17bsnR17b RPO31P04051 1460 aa6.44□□□□□ -1.38
snR17bsnR17b PRY3P47033 881 aa6.43□□□□□ -1.38
snR17bsnR17b YCF1P39109 1515 aaKnown RBP6.4□□□□□ -1.38
snR17bsnR17b PDR15Q04182 1529 aaKnown RBP6.4□□□□□ -1.39
snR17bsnR17b LEU3P08638 886 aa6.39□□□□□ -1.39
snR17bsnR17b PEP1P32319 1579 aa6.38□□□□□ -1.39
snR17bsnR17b KOG1P38873 1557 aa6.37□□□□□ -1.39
snR17bsnR17b CAB3P36076 571 aa6.37□□□□□ -1.39
snR17bsnR17b PDR10P51533 1564 aa6.36□□□□□ -1.39
snR17bsnR17b YPR148CQ06523 435 aa6.36□□□□□ -1.39
snR17bsnR17b VPS15P22219 1454 aa6.35□□□□□ -1.39
snR17bsnR17b EBP2P36049 427 aaKnown RBP6.35□□□□□ -1.39
snR17bsnR17b TFA1P36100 482 aa6.35□□□□□ -1.39
snR17bsnR17b PSD2P53037 1138 aaKnown RBP6.35□□□□□ -1.39
snR17bsnR17b TY3B-GQ99315 1547 aa6.33□□□□□ -1.4
snR17bsnR17b MLP2P40457 1679 aa6.33□□□□□ -1.4
snR17bsnR17b SRB8P25648 1427 aa6.32□□□□□ -1.4
snR17bsnR17b ULS1Q08562 1619 aa6.32□□□□□ -1.4
snR17bsnR17b YLR419WQ06698 1435 aaKnown RBP6.3□□□□□ -1.4
snR17bsnR17b MDS3P53094 1487 aa6.29□□□□□ -1.4
snR17bsnR17b MHP1P43638 1398 aa6.29□□□□□ -1.4
snR17bsnR17b CFT1Q06632 1357 aaKnown RBP6.29□□□□□ -1.4
snR17bsnR17b ORC1P54784 914 aaPredicted RBP6.28□□□□□ -1.4
snR17bsnR17b NUP159P40477 1460 aa6.28□□□□□ -1.4
snR17bsnR17b RQC2Q12532 1038 aaKnown RBP6.27□□□□□ -1.41
snR17bsnR17b SNT2P53127 1403 aa6.26□□□□□ -1.41
snR17bsnR17b NOP7P53261 605 aaKnown RBP6.26□□□□□ -1.41
snR17bsnR17b DNF1P32660 1571 aa6.26□□□□□ -1.41
snR17bsnR17b TY1B-DR3Q99231 1755 aa6.26□□□□□ -1.41
snR17bsnR17b IME2P32581 645 aa6.24□□□□□ -1.41
snR17bsnR17b TY2B-LR1P0C2J3 1770 aa6.23□□□□□ -1.41
snR17bsnR17b TY2B-FP0CX63 1770 aa6.23□□□□□ -1.41
snR17bsnR17b TY2B-GR2P0CX64 1770 aa6.23□□□□□ -1.41
snR17bsnR17b TY2B-CP25384 1770 aa6.23□□□□□ -1.41
snR17bsnR17b TY2B-DR2Q03494 1770 aa6.23□□□□□ -1.41
snR17bsnR17b TY1B-DR1Q03855 1755 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms