RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C DRS1P32892 752 aaKnown RBP5.76□□□□□ -1.49
RPA135YPR010C TFA1P36100 482 aa5.59□□□□□ -1.51
RPA135YPR010C SGS1P35187 1447 aa5.5□□□□□ -1.53
RPA135YPR010C RQC2Q12532 1038 aaKnown RBP5.48□□□□□ -1.53
RPA135YPR010C INO80P53115 1489 aa5.36□□□□□ -1.55
RPA135YPR010C TAF7Q05021 590 aa5.31□□□□□ -1.56
RPA135YPR010C BFR2Q06631 534 aaKnown RBP5.26□□□□□ -1.57
RPA135YPR010C SPA2P23201 1466 aaKnown RBP5.25□□□□□ -1.57
RPA135YPR010C TAF2P23255 1407 aa5.19□□□□□ -1.58
RPA135YPR010C SSN2P38931 1420 aa5.18□□□□□ -1.58
RPA135YPR010C MTC1P47018 478 aaKnown RBP5.15□□□□□ -1.59
RPA135YPR010C TCB3Q03640 1545 aaKnown RBP5.14□□□□□ -1.59
RPA135YPR010C SAS10Q12136 610 aaPredicted RBP5.12□□□□□ -1.59
RPA135YPR010C SPT6P23615 1451 aaKnown RBP5.1□□□□□ -1.59
RPA135YPR010C XRN1P22147 1528 aaKnown RBP5.05□□□□□ -1.6
RPA135YPR010C HSL1P34244 1518 aa5.03□□□□□ -1.6
RPA135YPR010C SKI3P17883 1432 aaKnown RBP5.02□□□□□ -1.61
RPA135YPR010C MON2P48563 1636 aaPredicted RBP5□□□□□ -1.61
RPA135YPR010C SWR1Q05471 1514 aa5□□□□□ -1.61
RPA135YPR010C DNA2P38859 1522 aa4.99□□□□□ -1.61
RPA135YPR010C ECM5Q03214 1411 aa4.98□□□□□ -1.61
RPA135YPR010C AVT3P36062 692 aa4.96□□□□□ -1.62
RPA135YPR010C IFH1P39520 1085 aa4.95□□□□□ -1.62
RPA135YPR010C TY1B-DR4Q07793 1604 aa4.95□□□□□ -1.62
RPA135YPR010C HIR3P47171 1648 aa4.94□□□□□ -1.62
RPA135YPR010C RSE1Q04693 1361 aaKnown RBP4.93□□□□□ -1.62
RPA135YPR010C DMA1P38823 416 aa4.88□□□□□ -1.63
RPA135YPR010C KOG1P38873 1557 aa4.87□□□□□ -1.63
RPA135YPR010C REV3P14284 1504 aa4.87□□□□□ -1.63
RPA135YPR010C BUD4P47136 1447 aa4.86□□□□□ -1.63
RPA135YPR010C RTT106P40161 455 aa4.8□□□□□ -1.64
RPA135YPR010C LEO1P38439 464 aa4.8□□□□□ -1.64
RPA135YPR010C STU1P38198 1513 aa4.79□□□□□ -1.64
RPA135YPR010C STH1P32597 1359 aa4.76□□□□□ -1.65
RPA135YPR010C CKB1P43639 278 aa4.76□□□□□ -1.65
RPA135YPR010C UFD4P33202 1483 aa4.75□□□□□ -1.65
RPA135YPR010C ORC1P54784 914 aaPredicted RBP4.74□□□□□ -1.65
RPA135YPR010C MDS3P53094 1487 aa4.73□□□□□ -1.65
RPA135YPR010C THO2P53552 1597 aaKnown RBP4.72□□□□□ -1.65
RPA135YPR010C YTA7P40340 1379 aa4.72□□□□□ -1.65
RPA135YPR010C ABP1P15891 592 aaKnown RBP4.71□□□□□ -1.65
RPA135YPR010C BPT1P14772 1559 aa4.7□□□□□ -1.66
RPA135YPR010C SSK2P53599 1579 aa4.7□□□□□ -1.66
RPA135YPR010C MYO2P19524 1574 aaKnown RBP4.69□□□□□ -1.66
RPA135YPR010C DIP2Q12220 943 aaPredicted RBP4.68□□□□□ -1.66
RPA135YPR010C LEU3P08638 886 aa4.68□□□□□ -1.66
RPA135YPR010C ESP1Q03018 1630 aa4.67□□□□□ -1.66
RPA135YPR010C CHD1P32657 1468 aa4.66□□□□□ -1.66
RPA135YPR010C MMS22Q06164 1454 aa4.66□□□□□ -1.66
RPA135YPR010C RKR1Q04781 1562 aa4.65□□□□□ -1.66
RPA135YPR010C ATG2P53855 1592 aa4.64□□□□□ -1.67
RPA135YPR010C IOC4Q04213 475 aa4.64□□□□□ -1.67
RPA135YPR010C SIN3P22579 1536 aa4.63□□□□□ -1.67
RPA135YPR010C SCC2Q04002 1493 aa4.63□□□□□ -1.67
RPA135YPR010C YPK9Q12697 1472 aa4.63□□□□□ -1.67
RPA135YPR010C POL1P13382 1468 aa4.63□□□□□ -1.67
RPA135YPR010C TOP2P06786 1428 aaKnown RBP4.61□□□□□ -1.67
RPA135YPR010C BUD21Q08492 214 aaPredicted RBP4.61□□□□□ -1.67
RPA135YPR010C TRM732Q03496 1420 aa4.6□□□□□ -1.67
RPA135YPR010C NOP7P53261 605 aaKnown RBP4.6□□□□□ -1.67
RPA135YPR010C SPP41P38904 1435 aa4.59□□□□□ -1.67
RPA135YPR010C SSM4P40318 1319 aa4.58□□□□□ -1.68
RPA135YPR010C YOR1P53049 1477 aa4.58□□□□□ -1.68
RPA135YPR010C URN1Q06525 465 aaKnown RBP4.58□□□□□ -1.68
RPA135YPR010C RPO31P04051 1460 aa4.58□□□□□ -1.68
RPA135YPR010C PEP1P32319 1579 aa4.57□□□□□ -1.68
RPA135YPR010C MET10P39692 1035 aa4.57□□□□□ -1.68
RPA135YPR010C IKI3Q06706 1349 aaKnown RBP4.57□□□□□ -1.68
RPA135YPR010C PAN1P32521 1480 aa4.57□□□□□ -1.68
RPA135YPR010C GEA1P47102 1408 aaPredicted RBP4.57□□□□□ -1.68
RPA135YPR010C POL5P39985 1022 aaKnown RBP4.56□□□□□ -1.68
RPA135YPR010C PAF1P38351 445 aa4.56□□□□□ -1.68
RPA135YPR010C SMC4Q12267 1418 aa4.55□□□□□ -1.68
RPA135YPR010C TSC11P40061 1430 aa4.55□□□□□ -1.68
RPA135YPR010C SNQ2P32568 1501 aaKnown RBP4.54□□□□□ -1.68
RPA135YPR010C YCF1P39109 1515 aaKnown RBP4.54□□□□□ -1.68
RPA135YPR010C NAP1P25293 417 aaKnown RBP4.53□□□□□ -1.68
RPA135YPR010C PDR15Q04182 1529 aaKnown RBP4.52□□□□□ -1.69
RPA135YPR010C MYO4P32492 1471 aa4.51□□□□□ -1.69
RPA135YPR010C NUP157P40064 1391 aaKnown RBP4.5□□□□□ -1.69
RPA135YPR010C TAF5P38129 798 aa4.5□□□□□ -1.69
RPA135YPR010C DMA2P53924 522 aa4.48□□□□□ -1.69
RPA135YPR010C VTH1P40438 1549 aa4.48□□□□□ -1.69
RPA135YPR010C VTH2P40890 1549 aa4.48□□□□□ -1.69
RPA135YPR010C VPS15P22219 1454 aa4.48□□□□□ -1.69
RPA135YPR010C NUP159P40477 1460 aa4.47□□□□□ -1.69
RPA135YPR010C CDC25P04821 1589 aa4.46□□□□□ -1.7
RPA135YPR010C KIP3P53086 805 aaKnown RBP4.45□□□□□ -1.7
RPA135YPR010C FUN12P39730 1002 aaKnown RBP4.44□□□□□ -1.7
RPA135YPR010C SPT7P35177 1332 aa4.44□□□□□ -1.7
RPA135YPR010C MLP2P40457 1679 aa4.44□□□□□ -1.7
RPA135YPR010C DNF1P32660 1571 aa4.44□□□□□ -1.7
RPA135YPR010C TY2B-LR1P0C2J3 1770 aa4.43□□□□□ -1.7
RPA135YPR010C TY2B-FP0CX63 1770 aa4.43□□□□□ -1.7
RPA135YPR010C TY2B-GR2P0CX64 1770 aa4.43□□□□□ -1.7
RPA135YPR010C TY2B-CP25384 1770 aa4.43□□□□□ -1.7
RPA135YPR010C TY2B-DR2Q03494 1770 aa4.43□□□□□ -1.7
RPA135YPR010C TY1B-DR1Q03855 1755 aa4.43□□□□□ -1.7
RPA135YPR010C TY2B-DR3Q07791 1770 aaKnown RBP4.43□□□□□ -1.7
RPA135YPR010C TY2B-OR1Q12113 1770 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms