RNA–Protein interactions for RNA: YPL021W

ECM23, Transcript of Non-essential protein of unconfirmed function, yeastyeast

Gene ECM23, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM23YPL021W FAP1P53971 965 aa13.76□□□□□ -0.21
ECM23YPL021W MTC1P47018 478 aaKnown RBP13.07□□□□□ -0.32
ECM23YPL021W PRY3P47033 881 aa13.03□□□□□ -0.32
ECM23YPL021W DRS1P32892 752 aaKnown RBP12.39□□□□□ -0.43
ECM23YPL021W YCK3P39962 524 aa12.28□□□□□ -0.44
ECM23YPL021W HAA1Q12753 694 aaKnown RBP11.98□□□□□ -0.49
ECM23YPL021W AAD16Q02895 342 aa11.93□□□□□ -0.5
ECM23YPL021W PRI1P10363 409 aa11.74□□□□□ -0.53
ECM23YPL021W TSR3Q12094 313 aaKnown RBP11.06□□□□□ -0.64
ECM23YPL021W ISW2Q08773 1120 aa10.85□□□□□ -0.67
ECM23YPL021W RPG1P38249 964 aaKnown RBP10.81□□□□□ -0.68
ECM23YPL021W DIP2Q12220 943 aaPredicted RBP10.79□□□□□ -0.68
ECM23YPL021W BUD31P25337 157 aaPredicted RBP10.77□□□□□ -0.69
ECM23YPL021W YGL015CP33199 130 aa10.69□□□□□ -0.7
ECM23YPL021W MRPL32P25348 183 aa10.53□□□□□ -0.72
ECM23YPL021W RSE1Q04693 1361 aaKnown RBP10.42□□□□□ -0.74
ECM23YPL021W AVT3P36062 692 aa10.42□□□□□ -0.74
ECM23YPL021W BFR2Q06631 534 aaKnown RBP10.41□□□□□ -0.74
ECM23YPL021W SIS1P25294 352 aaKnown RBP10.07□□□□□ -0.8
ECM23YPL021W RPL17AP05740 184 aaKnown RBP10.06□□□□□ -0.8
ECM23YPL021W RPL17BP46990 184 aaKnown RBP10.06□□□□□ -0.8
ECM23YPL021W REB1P21538 810 aa10.04□□□□□ -0.8
ECM23YPL021W CDC27P38042 758 aa9.7□□□□□ -0.86
ECM23YPL021W MAP2P38174 421 aaKnown RBP9.64□□□□□ -0.87
ECM23YPL021W SPT21P35209 758 aa9.6□□□□□ -0.87
ECM23YPL021W UBP9P39967 754 aa9.55□□□□□ -0.88
ECM23YPL021W UBP10P53874 792 aaPredicted RBP9.55□□□□□ -0.88
ECM23YPL021W YKR023WP36119 530 aaKnown RBP9.44□□□□□ -0.9
ECM23YPL021W RIM101P33400 625 aa9.31□□□□□ -0.92
ECM23YPL021W TFC8Q12308 588 aa9.27□□□□□ -0.93
ECM23YPL021W HOP09932 586 aa9.26□□□□□ -0.93
ECM23YPL021W TFA1P36100 482 aa9.24□□□□□ -0.93
ECM23YPL021W DCD1P06773 312 aa9.2□□□□□ -0.94
ECM23YPL021W TGL3P40308 642 aa9.19□□□□□ -0.94
ECM23YPL021W TIF4632P39936 914 aaKnown RBP9.18□□□□□ -0.94
ECM23YPL021W MON2P48563 1636 aaPredicted RBP9.09□□□□□ -0.95
ECM23YPL021W SCY1P53009 804 aa9.04□□□□□ -0.96
ECM23YPL021W INO80P53115 1489 aa9.03□□□□□ -0.96
ECM23YPL021W SLX5P32828 619 aaKnown RBP8.99□□□□□ -0.97
ECM23YPL021W OXP1P28273 1286 aa8.96□□□□□ -0.98
ECM23YPL021W BCH2P36122 765 aa8.96□□□□□ -0.98
ECM23YPL021W YIL055CP40523 627 aaKnown RBP8.93□□□□□ -0.98
ECM23YPL021W PTP3P40048 928 aa8.92□□□□□ -0.98
ECM23YPL021W YBL029C-AQ3E756 94 aa8.87□□□□□ -0.99
ECM23YPL021W YAH1Q12184 172 aaKnown RBP8.79□□□□□ -1
ECM23YPL021W EPS1P40557 701 aa8.78□□□□□ -1
ECM23YPL021W RSM7P47150 247 aa8.76□□□□□ -1.01
ECM23YPL021W TCB3Q03640 1545 aaKnown RBP8.75□□□□□ -1.01
ECM23YPL021W TY1B-DR4Q07793 1604 aa8.73□□□□□ -1.01
ECM23YPL021W SGS1P35187 1447 aa8.72□□□□□ -1.01
ECM23YPL021W BDF1P35817 686 aa8.72□□□□□ -1.01
ECM23YPL021W BBC1P47068 1157 aa8.71□□□□□ -1.02
ECM23YPL021W SWR1Q05471 1514 aa8.7□□□□□ -1.02
ECM23YPL021W AI2P03876 854 aa8.67□□□□□ -1.02
ECM23YPL021W DNA2P38859 1522 aa8.64□□□□□ -1.03
ECM23YPL021W VNX1P42839 908 aa8.62□□□□□ -1.03
ECM23YPL021W YJL171CP46992 396 aa8.61□□□□□ -1.03
ECM23YPL021W YLR271WQ06152 274 aa8.61□□□□□ -1.03
ECM23YPL021W AIR2Q12476 344 aaKnown RBP8.61□□□□□ -1.03
ECM23YPL021W SSP1P38871 571 aa8.59□□□□□ -1.03
ECM23YPL021W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
ECM23YPL021W MST1P07236 462 aa8.55□□□□□ -1.04
ECM23YPL021W SPP1Q03012 353 aa8.53□□□□□ -1.04
ECM23YPL021W KOG1P38873 1557 aa8.52□□□□□ -1.04
ECM23YPL021W PSD2P53037 1138 aaKnown RBP8.48□□□□□ -1.05
ECM23YPL021W NSR1P27476 414 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
ECM23YPL021W FKH1P40466 484 aa8.45□□□□□ -1.06
ECM23YPL021W YOR238WQ08634 303 aa8.43□□□□□ -1.06
ECM23YPL021W HSL1P34244 1518 aa8.43□□□□□ -1.06
ECM23YPL021W SPT6P23615 1451 aaKnown RBP8.41□□□□□ -1.06
ECM23YPL021W YAP5P40574 245 aa8.4□□□□□ -1.06
ECM23YPL021W WSC3Q12215 556 aa8.4□□□□□ -1.06
ECM23YPL021W MGA2P40578 1113 aa8.37□□□□□ -1.07
ECM23YPL021W MRM1P25270 412 aa8.36□□□□□ -1.07
ECM23YPL021W CST9Q06032 482 aa8.31□□□□□ -1.08
ECM23YPL021W SPA2P23201 1466 aaKnown RBP8.3□□□□□ -1.08
ECM23YPL021W BMT6Q12291 365 aa8.29□□□□□ -1.08
ECM23YPL021W HIR3P47171 1648 aa8.26□□□□□ -1.09
ECM23YPL021W TIF11P38912 153 aaKnown RBP8.25□□□□□ -1.09
ECM23YPL021W GTT3P39996 337 aa8.25□□□□□ -1.09
ECM23YPL021W RTG3P38165 486 aa8.21□□□□□ -1.1
ECM23YPL021W RGA2Q06407 1009 aa8.21□□□□□ -1.1
ECM23YPL021W LDB19Q12502 818 aa8.2□□□□□ -1.1
ECM23YPL021W PIB1Q06651 286 aa8.18□□□□□ -1.1
ECM23YPL021W ECM5Q03214 1411 aa8.18□□□□□ -1.1
ECM23YPL021W YMR1P47147 688 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
ECM23YPL021W VPS29P38759 282 aa8.14□□□□□ -1.11
ECM23YPL021W THO2P53552 1597 aaKnown RBP8.14□□□□□ -1.11
ECM23YPL021W XRN1P22147 1528 aaKnown RBP8.13□□□□□ -1.11
ECM23YPL021W SSN2P38931 1420 aa8.12□□□□□ -1.11
ECM23YPL021W BUD4P47136 1447 aa8.12□□□□□ -1.11
ECM23YPL021W DBP1P24784 617 aaKnown RBP8.1□□□□□ -1.11
ECM23YPL021W RCR1P38212 213 aa8.08□□□□□ -1.12
ECM23YPL021W YFR006WP43590 535 aa8.07□□□□□ -1.12
ECM23YPL021W STS1P38637 319 aa8.06□□□□□ -1.12
ECM23YPL021W IOC2Q12072 812 aa8.05□□□□□ -1.12
ECM23YPL021W ULI1P43604 169 aa8.04□□□□□ -1.12
ECM23YPL021W MSB4Q12317 492 aa8.04□□□□□ -1.12
ECM23YPL021W MDS3P53094 1487 aa8.01□□□□□ -1.13
ECM23YPL021W VMA1P17255 1071 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms