RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W DRS1P32892 752 aaKnown RBP12.39□□□□□ -0.43
CTF19YPL018W MTC1P47018 478 aaKnown RBP12.37□□□□□ -0.43
CTF19YPL018W SGS1P35187 1447 aa11.9□□□□□ -0.5
CTF19YPL018W INO80P53115 1489 aa11.89□□□□□ -0.51
CTF19YPL018W MON2P48563 1636 aaPredicted RBP11.76□□□□□ -0.53
CTF19YPL018W TCB3Q03640 1545 aaKnown RBP11.68□□□□□ -0.54
CTF19YPL018W TY1B-DR4Q07793 1604 aa11.48□□□□□ -0.57
CTF19YPL018W SWR1Q05471 1514 aa11.45□□□□□ -0.58
CTF19YPL018W FAP1P53971 965 aa11.3□□□□□ -0.6
CTF19YPL018W DNA2P38859 1522 aa11.29□□□□□ -0.6
CTF19YPL018W SPT6P23615 1451 aaKnown RBP11.27□□□□□ -0.6
CTF19YPL018W HSL1P34244 1518 aa11.25□□□□□ -0.61
CTF19YPL018W SPA2P23201 1466 aaKnown RBP11.25□□□□□ -0.61
CTF19YPL018W SSN2P38931 1420 aa11.18□□□□□ -0.62
CTF19YPL018W KOG1P38873 1557 aa11.16□□□□□ -0.62
CTF19YPL018W HIR3P47171 1648 aa11.05□□□□□ -0.64
CTF19YPL018W XRN1P22147 1528 aaKnown RBP10.97□□□□□ -0.65
CTF19YPL018W ECM5Q03214 1411 aa10.88□□□□□ -0.67
CTF19YPL018W BUD4P47136 1447 aa10.83□□□□□ -0.68
CTF19YPL018W THO2P53552 1597 aaKnown RBP10.77□□□□□ -0.69
CTF19YPL018W REV3P14284 1504 aa10.76□□□□□ -0.69
CTF19YPL018W TAF2P23255 1407 aa10.75□□□□□ -0.69
CTF19YPL018W PRY3P47033 881 aa10.72□□□□□ -0.69
CTF19YPL018W BFR2Q06631 534 aaKnown RBP10.72□□□□□ -0.69
CTF19YPL018W RSE1Q04693 1361 aaKnown RBP10.71□□□□□ -0.69
CTF19YPL018W MDS3P53094 1487 aa10.64□□□□□ -0.71
CTF19YPL018W SKI3P17883 1432 aaKnown RBP10.62□□□□□ -0.71
CTF19YPL018W SIN3P22579 1536 aa10.61□□□□□ -0.71
CTF19YPL018W ATG2P53855 1592 aa10.56□□□□□ -0.72
CTF19YPL018W DIP2Q12220 943 aaPredicted RBP10.55□□□□□ -0.72
CTF19YPL018W PEP1P32319 1579 aa10.55□□□□□ -0.72
CTF19YPL018W SSK2P53599 1579 aa10.55□□□□□ -0.72
CTF19YPL018W AVT3P36062 692 aa10.47□□□□□ -0.73
CTF19YPL018W ESP1Q03018 1630 aa10.45□□□□□ -0.74
CTF19YPL018W MYO2P19524 1574 aaKnown RBP10.39□□□□□ -0.75
CTF19YPL018W YPK9Q12697 1472 aa10.38□□□□□ -0.75
CTF19YPL018W UFD4P33202 1483 aa10.34□□□□□ -0.75
CTF19YPL018W BPT1P14772 1559 aa10.34□□□□□ -0.75
CTF19YPL018W SCC2Q04002 1493 aa10.31□□□□□ -0.76
CTF19YPL018W RPO31P04051 1460 aa10.27□□□□□ -0.77
CTF19YPL018W RQC2Q12532 1038 aaKnown RBP10.25□□□□□ -0.77
CTF19YPL018W POL1P13382 1468 aa10.22□□□□□ -0.77
CTF19YPL018W STU1P38198 1513 aa10.19□□□□□ -0.78
CTF19YPL018W TOP2P06786 1428 aaKnown RBP10.18□□□□□ -0.78
CTF19YPL018W YCF1P39109 1515 aaKnown RBP10.17□□□□□ -0.78
CTF19YPL018W RKR1Q04781 1562 aa10.16□□□□□ -0.78
CTF19YPL018W TFA1P36100 482 aa10.14□□□□□ -0.79
CTF19YPL018W CHD1P32657 1468 aa10.1□□□□□ -0.79
CTF19YPL018W YOR1P53049 1477 aa10.1□□□□□ -0.79
CTF19YPL018W SMC4Q12267 1418 aa10.09□□□□□ -0.79
CTF19YPL018W YCK3P39962 524 aa10.09□□□□□ -0.79
CTF19YPL018W YTA7P40340 1379 aa10.09□□□□□ -0.79
CTF19YPL018W TY2B-LR1P0C2J3 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-FP0CX63 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-GR2P0CX64 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-CP25384 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-DR2Q03494 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY1B-DR1Q03855 1755 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-DR3Q07791 1770 aaKnown RBP10.04□□□□□ -0.8
CTF19YPL018W TY2B-OR1Q12113 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-DR1Q12472 1770 aa10.04□□□□□ -0.8
CTF19YPL018W TY2B-OR2Q12501 1770 aa10.04□□□□□ -0.8
CTF19YPL018W CDC25P04821 1589 aa10.04□□□□□ -0.8
CTF19YPL018W MMS22Q06164 1454 aa10.04□□□□□ -0.8
CTF19YPL018W PAN1P32521 1480 aa10.03□□□□□ -0.8
CTF19YPL018W AAD16Q02895 342 aa10□□□□□ -0.81
CTF19YPL018W ISW2Q08773 1120 aa10□□□□□ -0.81
CTF19YPL018W SPP41P38904 1435 aa9.99□□□□□ -0.81
CTF19YPL018W SAS10Q12136 610 aaPredicted RBP9.98□□□□□ -0.81
CTF19YPL018W PRI1P10363 409 aa9.97□□□□□ -0.81
CTF19YPL018W MYO4P32492 1471 aa9.95□□□□□ -0.82
CTF19YPL018W TY1B-DR3Q99231 1755 aa9.94□□□□□ -0.82
CTF19YPL018W TRM732Q03496 1420 aa9.94□□□□□ -0.82
CTF19YPL018W TY1B-BRQ12193 1756 aa9.93□□□□□ -0.82
CTF19YPL018W TY1B-GR3Q12316 1755 aa9.93□□□□□ -0.82
CTF19YPL018W TY2B-BQ12491 1770 aa9.93□□□□□ -0.82
CTF19YPL018W TY1B-ORQ92393 1755 aa9.93□□□□□ -0.82
CTF19YPL018W DNF1P32660 1571 aa9.93□□□□□ -0.82
CTF19YPL018W TSC11P40061 1430 aa9.91□□□□□ -0.82
CTF19YPL018W RPG1P38249 964 aaKnown RBP9.91□□□□□ -0.82
CTF19YPL018W ESC1Q03661 1658 aaKnown RBP9.89□□□□□ -0.83
CTF19YPL018W TY1B-HO13535 1793 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-DR5P0C2I2 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-DR6P0C2I3 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-LR2P0C2I5 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-LR3P0C2I6 1755 aaKnown RBP9.88□□□□□ -0.83
CTF19YPL018W TY1B-PR1P0C2I9 1755 aaKnown RBP9.88□□□□□ -0.83
CTF19YPL018W TY1B-PR2P0C2J0 1756 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-PR3P0C2J1 1755 aaKnown RBP9.88□□□□□ -0.83
CTF19YPL018W TY1B-JR1P47098 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-ML2Q03434 1755 aaKnown RBP9.88□□□□□ -0.83
CTF19YPL018W TY1B-ER1Q03612 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-ML1Q04711 1755 aaKnown RBP9.88□□□□□ -0.83
CTF19YPL018W TY1B-GR2Q12269 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-OLQ12273 1755 aa9.88□□□□□ -0.83
CTF19YPL018W TY1B-PLQ12414 1755 aaKnown RBP9.88□□□□□ -0.83
CTF19YPL018W STH1P32597 1359 aa9.87□□□□□ -0.83
CTF19YPL018W MET5P47169 1442 aa9.86□□□□□ -0.83
CTF19YPL018W VTH1P40438 1549 aa9.86□□□□□ -0.83
CTF19YPL018W VTH2P40890 1549 aa9.86□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms