RNA–Protein interactions for RNA: YOR348C

PUT4, Transcript of Proline permease, yeastyeast

Gene PUT4, Length 1,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUT4YOR348C SGS1P35187 1447 aa24.64■■□□□ 1.54
PUT4YOR348C INO80P53115 1489 aa24.01■■□□□ 1.43
PUT4YOR348C SPA2P23201 1466 aaKnown RBP23.84■■□□□ 1.41
PUT4YOR348C SSN2P38931 1420 aa23.72■■□□□ 1.39
PUT4YOR348C TCB3Q03640 1545 aaKnown RBP23.56■■□□□ 1.36
PUT4YOR348C TY1B-DR4Q07793 1604 aa23.24■■□□□ 1.31
PUT4YOR348C DRS1P32892 752 aaKnown RBP23■■□□□ 1.27
PUT4YOR348C HSL1P34244 1518 aa22.93■■□□□ 1.26
PUT4YOR348C SPT6P23615 1451 aaKnown RBP22.84■■□□□ 1.25
PUT4YOR348C MON2P48563 1636 aaPredicted RBP22.8■■□□□ 1.24
PUT4YOR348C SWR1Q05471 1514 aa22.57■■□□□ 1.2
PUT4YOR348C HIR3P47171 1648 aa22.54■■□□□ 1.2
PUT4YOR348C XRN1P22147 1528 aaKnown RBP22.46■■□□□ 1.19
PUT4YOR348C REV3P14284 1504 aa22.17■■□□□ 1.14
PUT4YOR348C SIN3P22579 1536 aa22■■□□□ 1.11
PUT4YOR348C THO2P53552 1597 aaKnown RBP22■■□□□ 1.11
PUT4YOR348C TAF2P23255 1407 aa21.92■■□□□ 1.1
PUT4YOR348C SSK2P53599 1579 aa21.91■■□□□ 1.1
PUT4YOR348C DNA2P38859 1522 aa21.76■■□□□ 1.07
PUT4YOR348C KOG1P38873 1557 aa21.68■■□□□ 1.06
PUT4YOR348C ESP1Q03018 1630 aa21.68■■□□□ 1.06
PUT4YOR348C MYO2P19524 1574 aaKnown RBP21.63■■□□□ 1.05
PUT4YOR348C BUD4P47136 1447 aa21.6■■□□□ 1.05
PUT4YOR348C SKI3P17883 1432 aaKnown RBP21.53■■□□□ 1.04
PUT4YOR348C ECM5Q03214 1411 aa21.5■■□□□ 1.03
PUT4YOR348C ATG2P53855 1592 aa21.49■■□□□ 1.03
PUT4YOR348C CHD1P32657 1468 aa21.49■■□□□ 1.03
PUT4YOR348C MMS22Q06164 1454 aa21.46■■□□□ 1.03
PUT4YOR348C POL1P13382 1468 aa21.4■■□□□ 1.02
PUT4YOR348C YPK9Q12697 1472 aa21.35■■□□□ 1.01
PUT4YOR348C STU1P38198 1513 aa21.35■■□□□ 1.01
PUT4YOR348C PEP1P32319 1579 aa21.23■□□□□ 0.99
PUT4YOR348C YTA7P40340 1379 aa21.2■□□□□ 0.98
PUT4YOR348C MDS3P53094 1487 aa21.19■□□□□ 0.98
PUT4YOR348C BPT1P14772 1559 aa21.15■□□□□ 0.98
PUT4YOR348C SCC2Q04002 1493 aa21.14■□□□□ 0.98
PUT4YOR348C RKR1Q04781 1562 aa21.11■□□□□ 0.97
PUT4YOR348C YOR1P53049 1477 aa21.05■□□□□ 0.96
PUT4YOR348C SAS10Q12136 610 aaPredicted RBP21.03■□□□□ 0.96
PUT4YOR348C RPO31P04051 1460 aa21.03■□□□□ 0.96
PUT4YOR348C MYO4P32492 1471 aa20.93■□□□□ 0.94
PUT4YOR348C TOP2P06786 1428 aaKnown RBP20.92■□□□□ 0.94
PUT4YOR348C UFD4P33202 1483 aa20.91■□□□□ 0.94
PUT4YOR348C SMC4Q12267 1418 aa20.87■□□□□ 0.93
PUT4YOR348C YCF1P39109 1515 aaKnown RBP20.86■□□□□ 0.93
PUT4YOR348C RSE1Q04693 1361 aaKnown RBP20.76■□□□□ 0.91
PUT4YOR348C TY2B-LR1P0C2J3 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-FP0CX63 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-GR2P0CX64 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-CP25384 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-DR2Q03494 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY1B-DR1Q03855 1755 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-DR3Q07791 1770 aaKnown RBP20.76■□□□□ 0.91
PUT4YOR348C TY2B-OR1Q12113 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-DR1Q12472 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TY2B-OR2Q12501 1770 aa20.76■□□□□ 0.91
PUT4YOR348C TRM732Q03496 1420 aa20.72■□□□□ 0.91
PUT4YOR348C TY1B-DR3Q99231 1755 aa20.7■□□□□ 0.9
PUT4YOR348C SNQ2P32568 1501 aaKnown RBP20.68■□□□□ 0.9
PUT4YOR348C STH1P32597 1359 aa20.64■□□□□ 0.9
PUT4YOR348C TAF7Q05021 590 aa20.62■□□□□ 0.89
PUT4YOR348C TY2B-BQ12491 1770 aa20.59■□□□□ 0.89
PUT4YOR348C IKI3Q06706 1349 aaKnown RBP20.57■□□□□ 0.88
PUT4YOR348C MLP2P40457 1679 aa20.49■□□□□ 0.87
PUT4YOR348C SPP41P38904 1435 aa20.46■□□□□ 0.87
PUT4YOR348C PDR15Q04182 1529 aaKnown RBP20.46■□□□□ 0.87
PUT4YOR348C RQC2Q12532 1038 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C TY1B-HO13535 1793 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-DR5P0C2I2 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-DR6P0C2I3 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-LR2P0C2I5 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-LR3P0C2I6 1755 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C TY1B-PR1P0C2I9 1755 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C TY1B-PR2P0C2J0 1756 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-PR3P0C2J1 1755 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C TY1B-JR1P47098 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-ML2Q03434 1755 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C TY1B-ER1Q03612 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-ML1Q04711 1755 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C TY1B-GR2Q12269 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-OLQ12273 1755 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-PLQ12414 1755 aaKnown RBP20.41■□□□□ 0.86
PUT4YOR348C IFH1P39520 1085 aa20.41■□□□□ 0.86
PUT4YOR348C TY1B-BRQ12193 1756 aa20.39■□□□□ 0.86
PUT4YOR348C TY1B-GR3Q12316 1755 aa20.39■□□□□ 0.86
PUT4YOR348C TY1B-ORQ92393 1755 aa20.39■□□□□ 0.86
PUT4YOR348C GEA1P47102 1408 aaPredicted RBP20.36■□□□□ 0.85
PUT4YOR348C ULS1Q08562 1619 aa20.35■□□□□ 0.85
PUT4YOR348C NUP170P38181 1502 aa20.34■□□□□ 0.85
PUT4YOR348C SSM4P40318 1319 aa20.3■□□□□ 0.84
PUT4YOR348C TSC11P40061 1430 aa20.3■□□□□ 0.84
PUT4YOR348C VTH1P40438 1549 aa20.3■□□□□ 0.84
PUT4YOR348C VTH2P40890 1549 aa20.3■□□□□ 0.84
PUT4YOR348C CDC25P04821 1589 aa20.28■□□□□ 0.84
PUT4YOR348C PAN1P32521 1480 aa20.2■□□□□ 0.82
PUT4YOR348C SNT2P53127 1403 aa20.16■□□□□ 0.82
PUT4YOR348C TY3B-GQ99315 1547 aa20.13■□□□□ 0.81
PUT4YOR348C TY1B-JR2P47100 1755 aaKnown RBP20.1■□□□□ 0.81
PUT4YOR348C TY1B-ER2Q03619 1755 aa20.1■□□□□ 0.81
PUT4YOR348C TY1B-MR1Q04214 1755 aa20.1■□□□□ 0.81
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms