RNA–Protein interactions for RNA: YOR335C

ALA1, Transcript of Cytoplasmic and mitochondrial alanyl-tRNA synthetase, yeastyeast

Gene ALA1, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ALA1YOR335C SGS1P35187 1447 aa5.84□□□□□ -1.47
ALA1YOR335C SSN2P38931 1420 aa5.62□□□□□ -1.51
ALA1YOR335C SPA2P23201 1466 aaKnown RBP5.6□□□□□ -1.51
ALA1YOR335C DRS1P32892 752 aaKnown RBP5.56□□□□□ -1.52
ALA1YOR335C INO80P53115 1489 aa5.55□□□□□ -1.52
ALA1YOR335C MTC1P47018 478 aaKnown RBP5.51□□□□□ -1.53
ALA1YOR335C TCB3Q03640 1545 aaKnown RBP5.46□□□□□ -1.54
ALA1YOR335C SKI3P17883 1432 aaKnown RBP5.37□□□□□ -1.55
ALA1YOR335C SPT6P23615 1451 aaKnown RBP5.36□□□□□ -1.55
ALA1YOR335C HSL1P34244 1518 aa5.35□□□□□ -1.55
ALA1YOR335C TY1B-DR4Q07793 1604 aa5.34□□□□□ -1.55
ALA1YOR335C XRN1P22147 1528 aaKnown RBP5.32□□□□□ -1.56
ALA1YOR335C TAF2P23255 1407 aa5.31□□□□□ -1.56
ALA1YOR335C HIR3P47171 1648 aa5.27□□□□□ -1.57
ALA1YOR335C BFR2Q06631 534 aaKnown RBP5.26□□□□□ -1.57
ALA1YOR335C SWR1Q05471 1514 aa5.25□□□□□ -1.57
ALA1YOR335C MON2P48563 1636 aaPredicted RBP5.24□□□□□ -1.57
ALA1YOR335C SAS10Q12136 610 aaPredicted RBP5.2□□□□□ -1.58
ALA1YOR335C REV3P14284 1504 aa5.19□□□□□ -1.58
ALA1YOR335C RQC2Q12532 1038 aaKnown RBP5.17□□□□□ -1.58
ALA1YOR335C RSE1Q04693 1361 aaKnown RBP5.17□□□□□ -1.58
ALA1YOR335C CHD1P32657 1468 aa5.16□□□□□ -1.58
ALA1YOR335C NOP2P40991 618 aaKnown RBP5.15□□□□□ -1.58
ALA1YOR335C ECM5Q03214 1411 aa5.1□□□□□ -1.59
ALA1YOR335C DNA2P38859 1522 aa5.1□□□□□ -1.59
ALA1YOR335C MMS22Q06164 1454 aa5.09□□□□□ -1.59
ALA1YOR335C SSK2P53599 1579 aa5.09□□□□□ -1.59
ALA1YOR335C THO2P53552 1597 aaKnown RBP5.09□□□□□ -1.6
ALA1YOR335C NSR1P27476 414 aaKnown RBP RIP-Chip data5.09□□□□□ -1.6not detected
ALA1YOR335C STU1P38198 1513 aa5.08□□□□□ -1.6
ALA1YOR335C SIN3P22579 1536 aa5.06□□□□□ -1.6
ALA1YOR335C BUD4P47136 1447 aa5.06□□□□□ -1.6
ALA1YOR335C ESP1Q03018 1630 aa5.03□□□□□ -1.6
ALA1YOR335C BPT1P14772 1559 aa5.03□□□□□ -1.6
ALA1YOR335C UFD4P33202 1483 aa5.02□□□□□ -1.61
ALA1YOR335C IFH1P39520 1085 aa5.02□□□□□ -1.61
ALA1YOR335C MYO2P19524 1574 aaKnown RBP5.02□□□□□ -1.61
ALA1YOR335C KOG1P38873 1557 aa5.02□□□□□ -1.61
ALA1YOR335C YTA7P40340 1379 aa5.01□□□□□ -1.61
ALA1YOR335C POL1P13382 1468 aa5.01□□□□□ -1.61
ALA1YOR335C ATG2P53855 1592 aa4.98□□□□□ -1.61
ALA1YOR335C YPK9Q12697 1472 aa4.98□□□□□ -1.61
ALA1YOR335C SCC2Q04002 1493 aa4.97□□□□□ -1.61
ALA1YOR335C STH1P32597 1359 aa4.96□□□□□ -1.61
ALA1YOR335C TRM732Q03496 1420 aa4.96□□□□□ -1.62
ALA1YOR335C RKR1Q04781 1562 aa4.95□□□□□ -1.62
ALA1YOR335C MDS3P53094 1487 aa4.94□□□□□ -1.62
ALA1YOR335C YOR1P53049 1477 aa4.93□□□□□ -1.62
ALA1YOR335C IKI3Q06706 1349 aaKnown RBP4.92□□□□□ -1.62
ALA1YOR335C TAF7Q05021 590 aa4.92□□□□□ -1.62
ALA1YOR335C SSM4P40318 1319 aa4.92□□□□□ -1.62
ALA1YOR335C PEP1P32319 1579 aa4.91□□□□□ -1.62
ALA1YOR335C NUP170P38181 1502 aa4.91□□□□□ -1.62
ALA1YOR335C TOP2P06786 1428 aaKnown RBP4.91□□□□□ -1.62
ALA1YOR335C SPP41P38904 1435 aa4.9□□□□□ -1.62
ALA1YOR335C RPO31P04051 1460 aa4.9□□□□□ -1.62
ALA1YOR335C MYO4P32492 1471 aa4.88□□□□□ -1.63
ALA1YOR335C SNQ2P32568 1501 aaKnown RBP4.88□□□□□ -1.63
ALA1YOR335C SMC4Q12267 1418 aa4.88□□□□□ -1.63
ALA1YOR335C RTT106P40161 455 aa4.86□□□□□ -1.63
ALA1YOR335C YCF1P39109 1515 aaKnown RBP4.86□□□□□ -1.63
ALA1YOR335C ENP1P38333 483 aaKnown RBP4.86□□□□□ -1.63
ALA1YOR335C GEA1P47102 1408 aaPredicted RBP4.85□□□□□ -1.63
ALA1YOR335C PDR15Q04182 1529 aaKnown RBP4.83□□□□□ -1.64
ALA1YOR335C CAB3P36076 571 aa4.83□□□□□ -1.64
ALA1YOR335C EBP2P36049 427 aaKnown RBP4.82□□□□□ -1.64
ALA1YOR335C PAN1P32521 1480 aa4.81□□□□□ -1.64
ALA1YOR335C TSC11P40061 1430 aa4.81□□□□□ -1.64
ALA1YOR335C TY2B-LR1P0C2J3 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-FP0CX63 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-GR2P0CX64 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-CP25384 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-DR2Q03494 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY1B-DR1Q03855 1755 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-DR3Q07791 1770 aaKnown RBP4.8□□□□□ -1.64
ALA1YOR335C TY2B-OR1Q12113 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-DR1Q12472 1770 aa4.8□□□□□ -1.64
ALA1YOR335C TY2B-OR2Q12501 1770 aa4.8□□□□□ -1.64
ALA1YOR335C POL5P39985 1022 aaKnown RBP4.8□□□□□ -1.64
ALA1YOR335C CKB1P43639 278 aa4.8□□□□□ -1.64
ALA1YOR335C ORC1P54784 914 aaPredicted RBP4.79□□□□□ -1.64
ALA1YOR335C TY1B-DR3Q99231 1755 aa4.78□□□□□ -1.64
ALA1YOR335C LEU3P08638 886 aa4.78□□□□□ -1.64
ALA1YOR335C MLP2P40457 1679 aa4.78□□□□□ -1.64
ALA1YOR335C TY2B-BQ12491 1770 aa4.76□□□□□ -1.65
ALA1YOR335C VTH1P40438 1549 aa4.75□□□□□ -1.65
ALA1YOR335C VTH2P40890 1549 aa4.75□□□□□ -1.65
ALA1YOR335C VPS15P22219 1454 aa4.75□□□□□ -1.65
ALA1YOR335C ULS1Q08562 1619 aa4.75□□□□□ -1.65
ALA1YOR335C SPT7P35177 1332 aa4.75□□□□□ -1.65
ALA1YOR335C SEC3P33332 1336 aaKnown RBP4.74□□□□□ -1.65
ALA1YOR335C TY3B-GQ99315 1547 aa4.73□□□□□ -1.65
ALA1YOR335C TFA1P36100 482 aa4.73□□□□□ -1.65
ALA1YOR335C PDR10P51533 1564 aa4.72□□□□□ -1.65
ALA1YOR335C YPR148CQ06523 435 aa4.72□□□□□ -1.65
ALA1YOR335C SNT2P53127 1403 aa4.71□□□□□ -1.65
ALA1YOR335C CDC25P04821 1589 aa4.71□□□□□ -1.65
ALA1YOR335C PRS1P32895 427 aaKnown RBP4.71□□□□□ -1.66
ALA1YOR335C BUD21Q08492 214 aaPredicted RBP4.71□□□□□ -1.66
ALA1YOR335C TY1B-HO13535 1793 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms