RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeastyeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP2YNL311C MON2P48563 1636 aaPredicted RBP7.7□□□□□ -1.18
SKP2YNL311C INO80P53115 1489 aa7.63□□□□□ -1.19
SKP2YNL311C DNA2P38859 1522 aa7.26□□□□□ -1.25
SKP2YNL311C RSE1Q04693 1361 aaKnown RBP7.23□□□□□ -1.25
SKP2YNL311C KOG1P38873 1557 aa7.16□□□□□ -1.26
SKP2YNL311C SWR1Q05471 1514 aa7.1□□□□□ -1.27
SKP2YNL311C SPA2P23201 1466 aaKnown RBP6.88□□□□□ -1.31
SKP2YNL311C TCB3Q03640 1545 aaKnown RBP6.86□□□□□ -1.31
SKP2YNL311C TY1B-DR4Q07793 1604 aa6.85□□□□□ -1.31
SKP2YNL311C MTC1P47018 478 aaKnown RBP6.7□□□□□ -1.34
SKP2YNL311C MIF2P35201 549 aa6.54□□□□□ -1.36
SKP2YNL311C ECM5Q03214 1411 aa6.52□□□□□ -1.37
SKP2YNL311C THO2P53552 1597 aaKnown RBP6.51□□□□□ -1.37
SKP2YNL311C SPT6P23615 1451 aaKnown RBP6.5□□□□□ -1.37
SKP2YNL311C HSL1P34244 1518 aa6.49□□□□□ -1.37
SKP2YNL311C BUD4P47136 1447 aa6.47□□□□□ -1.37
SKP2YNL311C REV3P14284 1504 aa6.47□□□□□ -1.37
SKP2YNL311C MDS3P53094 1487 aa6.45□□□□□ -1.38
SKP2YNL311C SGS1P35187 1447 aa6.34□□□□□ -1.39
SKP2YNL311C PEP1P32319 1579 aa6.33□□□□□ -1.4
SKP2YNL311C HIR3P47171 1648 aa6.31□□□□□ -1.4
SKP2YNL311C BPT1P14772 1559 aa6.31□□□□□ -1.4
SKP2YNL311C YFR006WP43590 535 aa6.23□□□□□ -1.41
SKP2YNL311C YCF1P39109 1515 aaKnown RBP6.21□□□□□ -1.42
SKP2YNL311C ATG2P53855 1592 aa6.17□□□□□ -1.42
SKP2YNL311C MYO2P19524 1574 aaKnown RBP6.16□□□□□ -1.42
SKP2YNL311C LTE1P07866 1435 aa6.15□□□□□ -1.43
SKP2YNL311C SSK2P53599 1579 aa6.13□□□□□ -1.43
SKP2YNL311C MET5P47169 1442 aa6.12□□□□□ -1.43
SKP2YNL311C XRN1P22147 1528 aaKnown RBP6.1□□□□□ -1.43
SKP2YNL311C TAF2P23255 1407 aa6.08□□□□□ -1.44
SKP2YNL311C CDC25P04821 1589 aa6.05□□□□□ -1.44
SKP2YNL311C BNI1P41832 1953 aa6.04□□□□□ -1.44
SKP2YNL311C ABP1P15891 592 aaKnown RBP6.04□□□□□ -1.44
SKP2YNL311C DNF1P32660 1571 aa6.03□□□□□ -1.44
SKP2YNL311C RPA190P10964 1664 aaKnown RBP6.03□□□□□ -1.44
SKP2YNL311C GEA2P39993 1459 aaKnown RBP6.01□□□□□ -1.45
SKP2YNL311C ESC1Q03661 1658 aaKnown RBP6□□□□□ -1.45
SKP2YNL311C IRC20Q06554 1556 aa5.98□□□□□ -1.45
SKP2YNL311C SKI3P17883 1432 aaKnown RBP5.96□□□□□ -1.45
SKP2YNL311C RPO31P04051 1460 aa5.95□□□□□ -1.46
SKP2YNL311C RKR1Q04781 1562 aa5.95□□□□□ -1.46
SKP2YNL311C MMS1Q06211 1407 aa5.95□□□□□ -1.46
SKP2YNL311C SIN3P22579 1536 aa5.95□□□□□ -1.46
SKP2YNL311C ITT1Q04638 464 aa5.93□□□□□ -1.46
SKP2YNL311C CHD1P32657 1468 aa5.92□□□□□ -1.46
SKP2YNL311C UFD4P33202 1483 aa5.92□□□□□ -1.46
SKP2YNL311C ESP1Q03018 1630 aa5.85□□□□□ -1.47
SKP2YNL311C DRS2P39524 1355 aa5.85□□□□□ -1.47
SKP2YNL311C PAN1P32521 1480 aa5.84□□□□□ -1.47
SKP2YNL311C SCC2Q04002 1493 aa5.82□□□□□ -1.48
SKP2YNL311C DNF2Q12675 1612 aa5.81□□□□□ -1.48
SKP2YNL311C YPK9Q12697 1472 aa5.8□□□□□ -1.48
SKP2YNL311C YOR093CQ12275 1648 aa5.79□□□□□ -1.48
SKP2YNL311C DRS1P32892 752 aaKnown RBP5.77□□□□□ -1.49
SKP2YNL311C TY1B-BRQ12193 1756 aa5.77□□□□□ -1.49
SKP2YNL311C TY1B-GR3Q12316 1755 aa5.77□□□□□ -1.49
SKP2YNL311C TY1B-ORQ92393 1755 aa5.77□□□□□ -1.49
SKP2YNL311C VPS15P22219 1454 aa5.75□□□□□ -1.49
SKP2YNL311C TRM732Q03496 1420 aa5.73□□□□□ -1.49
SKP2YNL311C TY2B-LR1P0C2J3 1770 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-FP0CX63 1770 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-GR2P0CX64 1770 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-CP25384 1770 aa5.72□□□□□ -1.49
SKP2YNL311C FAP1P53971 965 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-DR2Q03494 1770 aa5.72□□□□□ -1.49
SKP2YNL311C TY1B-DR1Q03855 1755 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-DR3Q07791 1770 aaKnown RBP5.72□□□□□ -1.49
SKP2YNL311C TY2B-OR1Q12113 1770 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-DR1Q12472 1770 aa5.72□□□□□ -1.49
SKP2YNL311C TY2B-OR2Q12501 1770 aa5.72□□□□□ -1.49
SKP2YNL311C RQC2Q12532 1038 aaKnown RBP5.7□□□□□ -1.5
SKP2YNL311C NUP159P40477 1460 aa5.68□□□□□ -1.5
SKP2YNL311C MMS22Q06164 1454 aa5.68□□□□□ -1.5
SKP2YNL311C YRF1-1P0CX20 1796 aa5.68□□□□□ -1.5
SKP2YNL311C YRF1-5P0CX21 1796 aa5.68□□□□□ -1.5
SKP2YNL311C YRF1-8P0CX22 1796 aa5.68□□□□□ -1.5
SKP2YNL311C TY1B-HO13535 1793 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-DR5P0C2I2 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-DR6P0C2I3 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-LR2P0C2I5 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-LR3P0C2I6 1755 aaKnown RBP5.66□□□□□ -1.5
SKP2YNL311C TY1B-PR1P0C2I9 1755 aaKnown RBP5.66□□□□□ -1.5
SKP2YNL311C TY1B-PR2P0C2J0 1756 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-PR3P0C2J1 1755 aaKnown RBP5.66□□□□□ -1.5
SKP2YNL311C TY1B-JR1P47098 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-ML2Q03434 1755 aaKnown RBP5.66□□□□□ -1.5
SKP2YNL311C TY1B-ER1Q03612 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-ML1Q04711 1755 aaKnown RBP5.66□□□□□ -1.5
SKP2YNL311C TY1B-GR2Q12269 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-OLQ12273 1755 aa5.66□□□□□ -1.5
SKP2YNL311C TY1B-PLQ12414 1755 aaKnown RBP5.66□□□□□ -1.5
SKP2YNL311C TOP2P06786 1428 aaKnown RBP5.64□□□□□ -1.51
SKP2YNL311C NUP170P38181 1502 aa5.63□□□□□ -1.51
SKP2YNL311C TY2B-BQ12491 1770 aa5.62□□□□□ -1.51
SKP2YNL311C NTE1Q04958 1679 aa5.61□□□□□ -1.51
SKP2YNL311C SSN2P38931 1420 aa5.61□□□□□ -1.51
SKP2YNL311C TY1B-DR3Q99231 1755 aa5.57□□□□□ -1.52
SKP2YNL311C TRM3Q07527 1436 aa5.57□□□□□ -1.52
SKP2YNL311C SPO14P36126 1683 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms