RNA–Protein interactions for RNA: YNL290W

RFC3, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeastyeast

Gene RFC3, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFC3YNL290W MTC1P47018 478 aaKnown RBP9.04□□□□□ -0.96
RFC3YNL290W FAP1P53971 965 aa8.86□□□□□ -0.99
RFC3YNL290W DRS1P32892 752 aaKnown RBP8.54□□□□□ -1.04
RFC3YNL290W PRY3P47033 881 aa8.35□□□□□ -1.07
RFC3YNL290W AAD16Q02895 342 aa7.86□□□□□ -1.15
RFC3YNL290W YCK3P39962 524 aa7.8□□□□□ -1.16
RFC3YNL290W PRI1P10363 409 aa7.78□□□□□ -1.16
RFC3YNL290W HAA1Q12753 694 aaKnown RBP7.73□□□□□ -1.17
RFC3YNL290W ISW2Q08773 1120 aa7.55□□□□□ -1.2
RFC3YNL290W RPG1P38249 964 aaKnown RBP7.49□□□□□ -1.21
RFC3YNL290W DIP2Q12220 943 aaPredicted RBP7.47□□□□□ -1.21
RFC3YNL290W TSR3Q12094 313 aaKnown RBP7.36□□□□□ -1.23
RFC3YNL290W RSE1Q04693 1361 aaKnown RBP7.21□□□□□ -1.25
RFC3YNL290W BFR2Q06631 534 aaKnown RBP7.14□□□□□ -1.27
RFC3YNL290W AVT3P36062 692 aa7.12□□□□□ -1.27
RFC3YNL290W MRPL32P25348 183 aa7.06□□□□□ -1.28
RFC3YNL290W RPL17AP05740 184 aaKnown RBP7□□□□□ -1.29
RFC3YNL290W REB1P21538 810 aa7□□□□□ -1.29
RFC3YNL290W YGL015CP33199 130 aa7□□□□□ -1.29
RFC3YNL290W RPL17BP46990 184 aaKnown RBP7□□□□□ -1.29
RFC3YNL290W BUD31P25337 157 aaPredicted RBP6.79□□□□□ -1.32
RFC3YNL290W TFA1P36100 482 aa6.72□□□□□ -1.33
RFC3YNL290W INO80P53115 1489 aa6.63□□□□□ -1.35
RFC3YNL290W MON2P48563 1636 aaPredicted RBP6.62□□□□□ -1.35
RFC3YNL290W SPT21P35209 758 aa6.58□□□□□ -1.36
RFC3YNL290W CDC27P38042 758 aa6.58□□□□□ -1.36
RFC3YNL290W YKR023WP36119 530 aaKnown RBP6.55□□□□□ -1.36
RFC3YNL290W SGS1P35187 1447 aa6.54□□□□□ -1.36
RFC3YNL290W HOP09932 586 aa6.5□□□□□ -1.37
RFC3YNL290W DCD1P06773 312 aa6.47□□□□□ -1.37
RFC3YNL290W TY1B-DR4Q07793 1604 aa6.44□□□□□ -1.38
RFC3YNL290W MAP2P38174 421 aaKnown RBP6.43□□□□□ -1.38
RFC3YNL290W TFC8Q12308 588 aa6.43□□□□□ -1.38
RFC3YNL290W TCB3Q03640 1545 aaKnown RBP6.42□□□□□ -1.38
RFC3YNL290W SWR1Q05471 1514 aa6.42□□□□□ -1.38
RFC3YNL290W SIS1P25294 352 aaKnown RBP6.42□□□□□ -1.38
RFC3YNL290W UBP10P53874 792 aaPredicted RBP6.42□□□□□ -1.38
RFC3YNL290W RIM101P33400 625 aa6.37□□□□□ -1.39
RFC3YNL290W DNA2P38859 1522 aa6.36□□□□□ -1.39
RFC3YNL290W SCY1P53009 804 aa6.3□□□□□ -1.4
RFC3YNL290W HSL1P34244 1518 aa6.28□□□□□ -1.4
RFC3YNL290W UBP9P39967 754 aa6.27□□□□□ -1.41
RFC3YNL290W SPT6P23615 1451 aaKnown RBP6.25□□□□□ -1.41
RFC3YNL290W BCH2P36122 765 aa6.23□□□□□ -1.41
RFC3YNL290W KOG1P38873 1557 aa6.21□□□□□ -1.42
RFC3YNL290W TIF4632P39936 914 aaKnown RBP6.2□□□□□ -1.42
RFC3YNL290W PTP3P40048 928 aa6.2□□□□□ -1.42
RFC3YNL290W YIL055CP40523 627 aaKnown RBP6.2□□□□□ -1.42
RFC3YNL290W OXP1P28273 1286 aa6.19□□□□□ -1.42
RFC3YNL290W SLX5P32828 619 aaKnown RBP6.19□□□□□ -1.42
RFC3YNL290W SPA2P23201 1466 aaKnown RBP6.18□□□□□ -1.42
RFC3YNL290W TGL3P40308 642 aa6.17□□□□□ -1.42
RFC3YNL290W HIR3P47171 1648 aa6.16□□□□□ -1.42
RFC3YNL290W SSN2P38931 1420 aa6.14□□□□□ -1.43
RFC3YNL290W YAH1Q12184 172 aaKnown RBP6.12□□□□□ -1.43
RFC3YNL290W EPS1P40557 701 aa6.09□□□□□ -1.43
RFC3YNL290W XRN1P22147 1528 aaKnown RBP6.09□□□□□ -1.44
RFC3YNL290W ECM5Q03214 1411 aa6.06□□□□□ -1.44
RFC3YNL290W BDF1P35817 686 aa6.05□□□□□ -1.44
RFC3YNL290W RSM7P47150 247 aa6.04□□□□□ -1.44
RFC3YNL290W BBC1P47068 1157 aa6.02□□□□□ -1.45
RFC3YNL290W AI2P03876 854 aa5.99□□□□□ -1.45
RFC3YNL290W TAF2P23255 1407 aa5.99□□□□□ -1.45
RFC3YNL290W BUD4P47136 1447 aa5.99□□□□□ -1.45
RFC3YNL290W RQC2Q12532 1038 aaKnown RBP5.97□□□□□ -1.45
RFC3YNL290W REV3P14284 1504 aa5.97□□□□□ -1.45
RFC3YNL290W THO2P53552 1597 aaKnown RBP5.97□□□□□ -1.45
RFC3YNL290W MDS3P53094 1487 aa5.93□□□□□ -1.46
RFC3YNL290W YLR271WQ06152 274 aa5.92□□□□□ -1.46
RFC3YNL290W ATG2P53855 1592 aa5.92□□□□□ -1.46
RFC3YNL290W PEP1P32319 1579 aa5.9□□□□□ -1.46
RFC3YNL290W YBL029C-AQ3E756 94 aa5.88□□□□□ -1.47
RFC3YNL290W SKI3P17883 1432 aaKnown RBP5.88□□□□□ -1.47
RFC3YNL290W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
RFC3YNL290W SSP1P38871 571 aa5.86□□□□□ -1.47
RFC3YNL290W YOR238WQ08634 303 aa5.86□□□□□ -1.47
RFC3YNL290W SSK2P53599 1579 aa5.85□□□□□ -1.47
RFC3YNL290W SIN3P22579 1536 aa5.85□□□□□ -1.47
RFC3YNL290W ESP1Q03018 1630 aa5.83□□□□□ -1.48
RFC3YNL290W YAP5P40574 245 aa5.81□□□□□ -1.48
RFC3YNL290W MRM1P25270 412 aa5.79□□□□□ -1.48
RFC3YNL290W PSD2P53037 1138 aaKnown RBP5.79□□□□□ -1.48
RFC3YNL290W MST1P07236 462 aa5.78□□□□□ -1.48
RFC3YNL290W WSC3Q12215 556 aa5.77□□□□□ -1.49
RFC3YNL290W VNX1P42839 908 aa5.76□□□□□ -1.49
RFC3YNL290W PIB1Q06651 286 aa5.76□□□□□ -1.49
RFC3YNL290W BPT1P14772 1559 aa5.76□□□□□ -1.49
RFC3YNL290W GTT3P39996 337 aa5.74□□□□□ -1.49
RFC3YNL290W UFD4P33202 1483 aa5.73□□□□□ -1.49
RFC3YNL290W NSR1P27476 414 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
RFC3YNL290W SCC2Q04002 1493 aa5.72□□□□□ -1.49
RFC3YNL290W SPP1Q03012 353 aa5.72□□□□□ -1.49
RFC3YNL290W CST9Q06032 482 aa5.72□□□□□ -1.49
RFC3YNL290W MGA2P40578 1113 aa5.71□□□□□ -1.5
RFC3YNL290W YJL171CP46992 396 aa5.71□□□□□ -1.5
RFC3YNL290W MYO2P19524 1574 aaKnown RBP5.71□□□□□ -1.5
RFC3YNL290W YPK9Q12697 1472 aa5.71□□□□□ -1.5
RFC3YNL290W TY2B-LR1P0C2J3 1770 aa5.68□□□□□ -1.5
RFC3YNL290W TY2B-FP0CX63 1770 aa5.68□□□□□ -1.5
RFC3YNL290W TY2B-GR2P0CX64 1770 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms