RNA–Protein interactions for RNA: YNL216W

RAP1, Transcript of Essential DNA-binding transcription regulator that binds many loci, yeastyeast

Gene RAP1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAP1YNL216W DRS1P32892 752 aaKnown RBP11.14□□□□□ -0.63
RAP1YNL216W TFA1P36100 482 aa10.22□□□□□ -0.77
RAP1YNL216W MTC1P47018 478 aaKnown RBP10.1□□□□□ -0.79
RAP1YNL216W BFR2Q06631 534 aaKnown RBP10.07□□□□□ -0.8
RAP1YNL216W RQC2Q12532 1038 aaKnown RBP9.51□□□□□ -0.89
RAP1YNL216W AVT3P36062 692 aa9.37□□□□□ -0.91
RAP1YNL216W MON2P48563 1636 aaPredicted RBP9.23□□□□□ -0.93
RAP1YNL216W NOP2P40991 618 aaKnown RBP9.23□□□□□ -0.93
RAP1YNL216W TAF7Q05021 590 aa9.16□□□□□ -0.94
RAP1YNL216W DIP2Q12220 943 aaPredicted RBP9.14□□□□□ -0.95
RAP1YNL216W SPA2P23201 1466 aaKnown RBP9.09□□□□□ -0.95
RAP1YNL216W NSR1P27476 414 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
RAP1YNL216W SGS1P35187 1447 aa9.01□□□□□ -0.97
RAP1YNL216W SSN2P38931 1420 aa8.98□□□□□ -0.97
RAP1YNL216W SKI3P17883 1432 aaKnown RBP8.87□□□□□ -0.99
RAP1YNL216W INO80P53115 1489 aa8.84□□□□□ -0.99
RAP1YNL216W DMA1P38823 416 aa8.81□□□□□ -1
RAP1YNL216W CAB3P36076 571 aa8.75□□□□□ -1.01
RAP1YNL216W EBP2P36049 427 aaKnown RBP8.74□□□□□ -1.01
RAP1YNL216W YPR148CQ06523 435 aa8.58□□□□□ -1.04
RAP1YNL216W KOG1P38873 1557 aa8.57□□□□□ -1.04
RAP1YNL216W SWR1Q05471 1514 aa8.54□□□□□ -1.04
RAP1YNL216W LEO1P38439 464 aa8.51□□□□□ -1.05
RAP1YNL216W DNA2P38859 1522 aa8.51□□□□□ -1.05
RAP1YNL216W TY1B-DR4Q07793 1604 aa8.5□□□□□ -1.05
RAP1YNL216W RSE1Q04693 1361 aaKnown RBP8.49□□□□□ -1.05
RAP1YNL216W TCB3Q03640 1545 aaKnown RBP8.48□□□□□ -1.05
RAP1YNL216W ENP1P38333 483 aaKnown RBP8.47□□□□□ -1.05
RAP1YNL216W MMS22Q06164 1454 aa8.43□□□□□ -1.06
RAP1YNL216W SIS2P36024 562 aa8.41□□□□□ -1.06
RAP1YNL216W CHD1P32657 1468 aa8.34□□□□□ -1.07
RAP1YNL216W URN1Q06525 465 aaKnown RBP8.33□□□□□ -1.08
RAP1YNL216W UFD4P33202 1483 aa8.31□□□□□ -1.08
RAP1YNL216W SPT7P35177 1332 aa8.29□□□□□ -1.08
RAP1YNL216W POL5P39985 1022 aaKnown RBP8.27□□□□□ -1.09
RAP1YNL216W STH1P32597 1359 aa8.26□□□□□ -1.09
RAP1YNL216W PTP3P40048 928 aa8.25□□□□□ -1.09
RAP1YNL216W XRN1P22147 1528 aaKnown RBP8.24□□□□□ -1.09
RAP1YNL216W PRS1P32895 427 aaKnown RBP8.22□□□□□ -1.09
RAP1YNL216W TRM732Q03496 1420 aa8.21□□□□□ -1.09
RAP1YNL216W SAS10Q12136 610 aaPredicted RBP8.21□□□□□ -1.09
RAP1YNL216W SPP41P38904 1435 aa8.2□□□□□ -1.1
RAP1YNL216W IKI3Q06706 1349 aaKnown RBP8.19□□□□□ -1.1
RAP1YNL216W TCB2P48231 1178 aa8.15□□□□□ -1.1
RAP1YNL216W CLC1P17891 233 aa8.15□□□□□ -1.1
RAP1YNL216W IME2P32581 645 aa8.14□□□□□ -1.11
RAP1YNL216W SEC3P33332 1336 aaKnown RBP8.13□□□□□ -1.11
RAP1YNL216W LEU3P08638 886 aa8.12□□□□□ -1.11
RAP1YNL216W SSM4P40318 1319 aa8.1□□□□□ -1.11
RAP1YNL216W MNN4P36044 1178 aa8.1□□□□□ -1.11
RAP1YNL216W YFR016CP43597 1233 aaKnown RBP8.1□□□□□ -1.11
RAP1YNL216W ECM5Q03214 1411 aa8.09□□□□□ -1.11
RAP1YNL216W RTT106P40161 455 aa8.08□□□□□ -1.12
RAP1YNL216W CFT1Q06632 1357 aaKnown RBP8.07□□□□□ -1.12
RAP1YNL216W THO2P53552 1597 aaKnown RBP8.04□□□□□ -1.12
RAP1YNL216W OPY1P38271 328 aa8.03□□□□□ -1.12
RAP1YNL216W MYO2P19524 1574 aaKnown RBP8.02□□□□□ -1.13
RAP1YNL216W AIM44Q99299 758 aa8□□□□□ -1.13
RAP1YNL216W RPC31P17890 251 aa7.98□□□□□ -1.13
RAP1YNL216W EAF7P53911 425 aaKnown RBP7.98□□□□□ -1.13
RAP1YNL216W HSL1P34244 1518 aa7.98□□□□□ -1.13
RAP1YNL216W SSP1P38871 571 aa7.97□□□□□ -1.13
RAP1YNL216W RPL17AP05740 184 aaKnown RBP7.96□□□□□ -1.13
RAP1YNL216W RPL17BP46990 184 aaKnown RBP7.96□□□□□ -1.13
RAP1YNL216W BUD4P47136 1447 aa7.96□□□□□ -1.14
RAP1YNL216W STU1P38198 1513 aa7.96□□□□□ -1.14
RAP1YNL216W FUN12P39730 1002 aaKnown RBP7.95□□□□□ -1.14
RAP1YNL216W PSD2P53037 1138 aaKnown RBP7.95□□□□□ -1.14
RAP1YNL216W YTA7P40340 1379 aa7.94□□□□□ -1.14
RAP1YNL216W PDR10P51533 1564 aa7.94□□□□□ -1.14
RAP1YNL216W TAF2P23255 1407 aa7.94□□□□□ -1.14
RAP1YNL216W CWC22P53333 577 aaKnown RBP7.93□□□□□ -1.14
RAP1YNL216W SCC2Q04002 1493 aa7.93□□□□□ -1.14
RAP1YNL216W ABP1P15891 592 aaKnown RBP7.92□□□□□ -1.14
RAP1YNL216W SRB8P25648 1427 aa7.92□□□□□ -1.14
RAP1YNL216W SPT6P23615 1451 aaKnown RBP7.92□□□□□ -1.14
RAP1YNL216W RIM101P33400 625 aa7.91□□□□□ -1.14
RAP1YNL216W DMA2P53924 522 aa7.91□□□□□ -1.14
RAP1YNL216W BPT1P14772 1559 aa7.91□□□□□ -1.14
RAP1YNL216W NUP170P38181 1502 aa7.91□□□□□ -1.14
RAP1YNL216W FPR3P38911 411 aaKnown RBP7.9□□□□□ -1.15
RAP1YNL216W SNF7P39929 240 aaKnown RBP7.89□□□□□ -1.15
RAP1YNL216W ISW2Q08773 1120 aa7.89□□□□□ -1.15
RAP1YNL216W PEP1P32319 1579 aa7.89□□□□□ -1.15
RAP1YNL216W RPS0BP46654 252 aaKnown RBP7.88□□□□□ -1.15
RAP1YNL216W REV3P14284 1504 aa7.87□□□□□ -1.15
RAP1YNL216W HIR3P47171 1648 aa7.87□□□□□ -1.15
RAP1YNL216W YLR419WQ06698 1435 aaKnown RBP7.86□□□□□ -1.15
RAP1YNL216W QCR6P00127 147 aa7.86□□□□□ -1.15
RAP1YNL216W YGR130CP53278 816 aa7.86□□□□□ -1.15
RAP1YNL216W SPT21P35209 758 aa7.85□□□□□ -1.15
RAP1YNL216W PAN1P32521 1480 aa7.85□□□□□ -1.15
RAP1YNL216W POL1P13382 1468 aa7.84□□□□□ -1.15
RAP1YNL216W TOP2P06786 1428 aaKnown RBP7.84□□□□□ -1.15
RAP1YNL216W RPG1P38249 964 aaKnown RBP7.83□□□□□ -1.16
RAP1YNL216W SSK2P53599 1579 aa7.82□□□□□ -1.16
RAP1YNL216W ROX1P25042 368 aa7.81□□□□□ -1.16
RAP1YNL216W IFH1P39520 1085 aa7.8□□□□□ -1.16
RAP1YNL216W PAF1P38351 445 aa7.8□□□□□ -1.16
RAP1YNL216W ENV11P53246 860 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms