RNA–Protein interactions for RNA: YNL104C

LEU4, Transcript of Alpha-isopropylmalate synthase (2-isopropylmalate synthase), yeastyeast

Gene LEU4, Length 1,860 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LEU4YNL104C SGS1P35187 1447 aa14.32□□□□□ -0.12
LEU4YNL104C SPA2P23201 1466 aaKnown RBP13.96□□□□□ -0.17
LEU4YNL104C INO80P53115 1489 aa13.9□□□□□ -0.19
LEU4YNL104C SSN2P38931 1420 aa13.85□□□□□ -0.19
LEU4YNL104C TCB3Q03640 1545 aaKnown RBP13.56□□□□□ -0.24
LEU4YNL104C DRS1P32892 752 aaKnown RBP13.42□□□□□ -0.26
LEU4YNL104C TY1B-DR4Q07793 1604 aa13.37□□□□□ -0.27
LEU4YNL104C HSL1P34244 1518 aa13.2□□□□□ -0.3
LEU4YNL104C MON2P48563 1636 aaPredicted RBP13.19□□□□□ -0.3
LEU4YNL104C SPT6P23615 1451 aaKnown RBP13.14□□□□□ -0.31
LEU4YNL104C HIR3P47171 1648 aa12.99□□□□□ -0.33
LEU4YNL104C XRN1P22147 1528 aaKnown RBP12.96□□□□□ -0.33
LEU4YNL104C SWR1Q05471 1514 aa12.89□□□□□ -0.35
LEU4YNL104C REV3P14284 1504 aa12.8□□□□□ -0.36
LEU4YNL104C SKI3P17883 1432 aaKnown RBP12.76□□□□□ -0.37
LEU4YNL104C SIN3P22579 1536 aa12.74□□□□□ -0.37
LEU4YNL104C THO2P53552 1597 aaKnown RBP12.73□□□□□ -0.37
LEU4YNL104C SSK2P53599 1579 aa12.68□□□□□ -0.38
LEU4YNL104C CHD1P32657 1468 aa12.64□□□□□ -0.39
LEU4YNL104C TAF2P23255 1407 aa12.64□□□□□ -0.39
LEU4YNL104C MMS22Q06164 1454 aa12.59□□□□□ -0.39
LEU4YNL104C ESP1Q03018 1630 aa12.54□□□□□ -0.4
LEU4YNL104C DNA2P38859 1522 aa12.54□□□□□ -0.4
LEU4YNL104C MYO2P19524 1574 aaKnown RBP12.51□□□□□ -0.41
LEU4YNL104C POL1P13382 1468 aa12.44□□□□□ -0.42
LEU4YNL104C KOG1P38873 1557 aa12.43□□□□□ -0.42
LEU4YNL104C STU1P38198 1513 aa12.41□□□□□ -0.42
LEU4YNL104C BUD4P47136 1447 aa12.39□□□□□ -0.43
LEU4YNL104C ATG2P53855 1592 aa12.37□□□□□ -0.43
LEU4YNL104C YTA7P40340 1379 aa12.37□□□□□ -0.43
LEU4YNL104C YPK9Q12697 1472 aa12.36□□□□□ -0.43
LEU4YNL104C ECM5Q03214 1411 aa12.31□□□□□ -0.44
LEU4YNL104C BPT1P14772 1559 aa12.29□□□□□ -0.44
LEU4YNL104C SAS10Q12136 610 aaPredicted RBP12.25□□□□□ -0.45
LEU4YNL104C YOR1P53049 1477 aa12.22□□□□□ -0.45
LEU4YNL104C RKR1Q04781 1562 aa12.22□□□□□ -0.45
LEU4YNL104C SCC2Q04002 1493 aa12.21□□□□□ -0.46
LEU4YNL104C PEP1P32319 1579 aa12.2□□□□□ -0.46
LEU4YNL104C UFD4P33202 1483 aa12.19□□□□□ -0.46
LEU4YNL104C MYO4P32492 1471 aa12.17□□□□□ -0.46
LEU4YNL104C RSE1Q04693 1361 aaKnown RBP12.17□□□□□ -0.46
LEU4YNL104C TRM732Q03496 1420 aa12.17□□□□□ -0.46
LEU4YNL104C RPO31P04051 1460 aa12.17□□□□□ -0.46
LEU4YNL104C MDS3P53094 1487 aa12.12□□□□□ -0.47
LEU4YNL104C TOP2P06786 1428 aaKnown RBP12.11□□□□□ -0.47
LEU4YNL104C SMC4Q12267 1418 aa12.11□□□□□ -0.47
LEU4YNL104C IKI3Q06706 1349 aaKnown RBP12.11□□□□□ -0.47
LEU4YNL104C YCF1P39109 1515 aaKnown RBP12.06□□□□□ -0.48
LEU4YNL104C TAF7Q05021 590 aa12.04□□□□□ -0.48
LEU4YNL104C SNQ2P32568 1501 aaKnown RBP12.04□□□□□ -0.48
LEU4YNL104C STH1P32597 1359 aa12.01□□□□□ -0.49
LEU4YNL104C TY2B-LR1P0C2J3 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-FP0CX63 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-GR2P0CX64 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-CP25384 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-DR2Q03494 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY1B-DR1Q03855 1755 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-DR3Q07791 1770 aaKnown RBP11.99□□□□□ -0.49
LEU4YNL104C TY2B-OR1Q12113 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-DR1Q12472 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY2B-OR2Q12501 1770 aa11.99□□□□□ -0.49
LEU4YNL104C TY1B-DR3Q99231 1755 aa11.98□□□□□ -0.49
LEU4YNL104C NUP170P38181 1502 aa11.97□□□□□ -0.49
LEU4YNL104C SSM4P40318 1319 aa11.92□□□□□ -0.5
LEU4YNL104C SPP41P38904 1435 aa11.91□□□□□ -0.5
LEU4YNL104C TY2B-BQ12491 1770 aa11.9□□□□□ -0.5
LEU4YNL104C MLP2P40457 1679 aa11.89□□□□□ -0.51
LEU4YNL104C PDR15Q04182 1529 aaKnown RBP11.88□□□□□ -0.51
LEU4YNL104C GEA1P47102 1408 aaPredicted RBP11.86□□□□□ -0.51
LEU4YNL104C IFH1P39520 1085 aa11.85□□□□□ -0.51
LEU4YNL104C ULS1Q08562 1619 aa11.82□□□□□ -0.52
LEU4YNL104C TY1B-HO13535 1793 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-DR5P0C2I2 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-DR6P0C2I3 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-LR2P0C2I5 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-LR3P0C2I6 1755 aaKnown RBP11.79□□□□□ -0.52
LEU4YNL104C TY1B-PR1P0C2I9 1755 aaKnown RBP11.79□□□□□ -0.52
LEU4YNL104C TY1B-PR2P0C2J0 1756 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-PR3P0C2J1 1755 aaKnown RBP11.79□□□□□ -0.52
LEU4YNL104C TY1B-JR1P47098 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-ML2Q03434 1755 aaKnown RBP11.79□□□□□ -0.52
LEU4YNL104C TY1B-ER1Q03612 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-ML1Q04711 1755 aaKnown RBP11.79□□□□□ -0.52
LEU4YNL104C TY1B-GR2Q12269 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-OLQ12273 1755 aa11.79□□□□□ -0.52
LEU4YNL104C TY1B-PLQ12414 1755 aaKnown RBP11.79□□□□□ -0.52
LEU4YNL104C NSR1P27476 414 aaKnown RBP RIP-Chip data11.78□□□□□ -0.52not detected
LEU4YNL104C TSC11P40061 1430 aa11.78□□□□□ -0.52
LEU4YNL104C TY1B-BRQ12193 1756 aa11.76□□□□□ -0.53
LEU4YNL104C TY1B-GR3Q12316 1755 aa11.76□□□□□ -0.53
LEU4YNL104C TY1B-ORQ92393 1755 aa11.76□□□□□ -0.53
LEU4YNL104C PAN1P32521 1480 aa11.75□□□□□ -0.53
LEU4YNL104C VTH1P40438 1549 aa11.72□□□□□ -0.53
LEU4YNL104C VTH2P40890 1549 aa11.72□□□□□ -0.53
LEU4YNL104C TY3B-GQ99315 1547 aa11.72□□□□□ -0.53
LEU4YNL104C SNT2P53127 1403 aa11.71□□□□□ -0.54
LEU4YNL104C RQC2Q12532 1038 aaKnown RBP11.69□□□□□ -0.54
LEU4YNL104C CDC25P04821 1589 aa11.65□□□□□ -0.54
LEU4YNL104C VPS15P22219 1454 aa11.64□□□□□ -0.55
LEU4YNL104C TY1B-JR2P47100 1755 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms