RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W DRS1P32892 752 aaKnown RBP14.39□□□□□ -0.11
SNN1YNL086W MTC1P47018 478 aaKnown RBP13.69□□□□□ -0.22
SNN1YNL086W INO80P53115 1489 aa13.35□□□□□ -0.27
SNN1YNL086W MON2P48563 1636 aaPredicted RBP13.28□□□□□ -0.28
SNN1YNL086W BFR2Q06631 534 aaKnown RBP12.75□□□□□ -0.37
SNN1YNL086W DNA2P38859 1522 aa12.7□□□□□ -0.38
SNN1YNL086W SWR1Q05471 1514 aa12.54□□□□□ -0.4
SNN1YNL086W RSE1Q04693 1361 aaKnown RBP12.49□□□□□ -0.41
SNN1YNL086W KOG1P38873 1557 aa12.43□□□□□ -0.42
SNN1YNL086W TFA1P36100 482 aa12.41□□□□□ -0.42
SNN1YNL086W TCB3Q03640 1545 aaKnown RBP12.23□□□□□ -0.45
SNN1YNL086W TY1B-DR4Q07793 1604 aa12.19□□□□□ -0.46
SNN1YNL086W DIP2Q12220 943 aaPredicted RBP12.04□□□□□ -0.48
SNN1YNL086W AVT3P36062 692 aa12.03□□□□□ -0.48
SNN1YNL086W SGS1P35187 1447 aa11.85□□□□□ -0.51
SNN1YNL086W SPA2P23201 1466 aaKnown RBP11.8□□□□□ -0.52
SNN1YNL086W SPT6P23615 1451 aaKnown RBP11.79□□□□□ -0.52
SNN1YNL086W HSL1P34244 1518 aa11.77□□□□□ -0.52
SNN1YNL086W ECM5Q03214 1411 aa11.7□□□□□ -0.54
SNN1YNL086W BUD4P47136 1447 aa11.54□□□□□ -0.56
SNN1YNL086W THO2P53552 1597 aaKnown RBP11.49□□□□□ -0.57
SNN1YNL086W HIR3P47171 1648 aa11.49□□□□□ -0.57
SNN1YNL086W MDS3P53094 1487 aa11.48□□□□□ -0.57
SNN1YNL086W REV3P14284 1504 aa11.33□□□□□ -0.6
SNN1YNL086W RQC2Q12532 1038 aaKnown RBP11.31□□□□□ -0.6
SNN1YNL086W XRN1P22147 1528 aaKnown RBP11.25□□□□□ -0.61
SNN1YNL086W PEP1P32319 1579 aa11.24□□□□□ -0.61
SNN1YNL086W BPT1P14772 1559 aa11.19□□□□□ -0.62
SNN1YNL086W ATG2P53855 1592 aa11.12□□□□□ -0.63
SNN1YNL086W ISW2Q08773 1120 aa11.03□□□□□ -0.64
SNN1YNL086W SKI3P17883 1432 aaKnown RBP11.01□□□□□ -0.65
SNN1YNL086W MIF2P35201 549 aa11.01□□□□□ -0.65
SNN1YNL086W TAF2P23255 1407 aa11□□□□□ -0.65
SNN1YNL086W YCF1P39109 1515 aaKnown RBP10.99□□□□□ -0.65
SNN1YNL086W SSK2P53599 1579 aa10.85□□□□□ -0.67
SNN1YNL086W RPG1P38249 964 aaKnown RBP10.83□□□□□ -0.68
SNN1YNL086W UFD4P33202 1483 aa10.8□□□□□ -0.68
SNN1YNL086W SIN3P22579 1536 aa10.78□□□□□ -0.68
SNN1YNL086W RPL17AP05740 184 aaKnown RBP10.73□□□□□ -0.69
SNN1YNL086W RPL17BP46990 184 aaKnown RBP10.73□□□□□ -0.69
SNN1YNL086W SSN2P38931 1420 aa10.72□□□□□ -0.69
SNN1YNL086W LTE1P07866 1435 aa10.67□□□□□ -0.7
SNN1YNL086W MET5P47169 1442 aa10.67□□□□□ -0.7
SNN1YNL086W MYO2P19524 1574 aaKnown RBP10.67□□□□□ -0.7
SNN1YNL086W ESP1Q03018 1630 aa10.66□□□□□ -0.7
SNN1YNL086W DNF1P32660 1571 aa10.65□□□□□ -0.71
SNN1YNL086W CHD1P32657 1468 aa10.63□□□□□ -0.71
SNN1YNL086W YFR006WP43590 535 aa10.63□□□□□ -0.71
SNN1YNL086W CDC25P04821 1589 aa10.63□□□□□ -0.71
SNN1YNL086W SCC2Q04002 1493 aa10.62□□□□□ -0.71
SNN1YNL086W PRI1P10363 409 aa10.62□□□□□ -0.71
SNN1YNL086W ABP1P15891 592 aaKnown RBP10.62□□□□□ -0.71
SNN1YNL086W ESC1Q03661 1658 aaKnown RBP10.6□□□□□ -0.71
SNN1YNL086W REB1P21538 810 aa10.57□□□□□ -0.72
SNN1YNL086W RPA190P10964 1664 aaKnown RBP10.57□□□□□ -0.72
SNN1YNL086W YPK9Q12697 1472 aa10.56□□□□□ -0.72
SNN1YNL086W ITT1Q04638 464 aa10.56□□□□□ -0.72
SNN1YNL086W RKR1Q04781 1562 aa10.55□□□□□ -0.72
SNN1YNL086W FAP1P53971 965 aa10.54□□□□□ -0.72
SNN1YNL086W BNI1P41832 1953 aa10.53□□□□□ -0.72
SNN1YNL086W GEA2P39993 1459 aaKnown RBP10.53□□□□□ -0.72
SNN1YNL086W RPO31P04051 1460 aa10.52□□□□□ -0.73
SNN1YNL086W PAN1P32521 1480 aa10.5□□□□□ -0.73
SNN1YNL086W MMS1Q06211 1407 aa10.48□□□□□ -0.73
SNN1YNL086W DMA1P38823 416 aa10.46□□□□□ -0.73
SNN1YNL086W TY2B-LR1P0C2J3 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-FP0CX63 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-GR2P0CX64 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-CP25384 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-DR2Q03494 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY1B-DR1Q03855 1755 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-DR3Q07791 1770 aaKnown RBP10.42□□□□□ -0.74
SNN1YNL086W TY2B-OR1Q12113 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY1B-BRQ12193 1756 aa10.42□□□□□ -0.74
SNN1YNL086W TY1B-GR3Q12316 1755 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-DR1Q12472 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY2B-OR2Q12501 1770 aa10.42□□□□□ -0.74
SNN1YNL086W TY1B-ORQ92393 1755 aa10.42□□□□□ -0.74
SNN1YNL086W PTP3P40048 928 aa10.42□□□□□ -0.74
SNN1YNL086W AAD16Q02895 342 aa10.38□□□□□ -0.75
SNN1YNL086W RIM101P33400 625 aa10.37□□□□□ -0.75
SNN1YNL086W TRM732Q03496 1420 aa10.37□□□□□ -0.75
SNN1YNL086W DRS2P39524 1355 aa10.36□□□□□ -0.75
SNN1YNL086W SPT21P35209 758 aa10.35□□□□□ -0.75
SNN1YNL086W MMS22Q06164 1454 aa10.34□□□□□ -0.75
SNN1YNL086W TOP2P06786 1428 aaKnown RBP10.32□□□□□ -0.76
SNN1YNL086W IRC20Q06554 1556 aa10.3□□□□□ -0.76
SNN1YNL086W VPS15P22219 1454 aa10.3□□□□□ -0.76
SNN1YNL086W TY1B-HO13535 1793 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-DR5P0C2I2 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-DR6P0C2I3 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-LR2P0C2I5 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-LR3P0C2I6 1755 aaKnown RBP10.27□□□□□ -0.77
SNN1YNL086W TY1B-PR1P0C2I9 1755 aaKnown RBP10.27□□□□□ -0.77
SNN1YNL086W TY1B-PR2P0C2J0 1756 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-PR3P0C2J1 1755 aaKnown RBP10.27□□□□□ -0.77
SNN1YNL086W TY1B-JR1P47098 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-ML2Q03434 1755 aaKnown RBP10.27□□□□□ -0.77
SNN1YNL086W TY1B-ER1Q03612 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-ML1Q04711 1755 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms